RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 FBXO43Q4G163 708 aa13.03□□□□□ -0.32
TPT1-201ENST00000309246 C4orf50Q6ZRC1 276 aa13.03□□□□□ -0.32
TPT1-201ENST00000309246 LIMS2Q7Z4I7 341 aa13.03□□□□□ -0.32
TPT1-201ENST00000309246 EXOC4Q96A65 974 aa13.03□□□□□ -0.32
TPT1-201ENST00000309246 LINC00597Q9H2U6 94 aa13.03□□□□□ -0.32
TPT1-201ENST00000309246 MAGEC2Q9UBF1 373 aaPredicted RBP13.03□□□□□ -0.32
TPT1-201ENST00000309246 CDH9Q9ULB4 789 aa13.03□□□□□ -0.32
TPT1-201ENST00000309246 CNOT1A5YKK6 2376 aaKnown RBP13.03□□□□□ -0.32
TPT1-201ENST00000309246 ZNF233A6NK53 670 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 DCLK1O15075 740 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 KIAA0391O15091 583 aaKnown RBP13.02□□□□□ -0.33
TPT1-201ENST00000309246 HDCP19113 662 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 GRIK1P39086 918 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 LIMK1P53667 647 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 USP46P62068 366 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 CYP27A1Q02318 531 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 SURF1Q15526 300 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 PLA2G2CQ5R387 149 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 TCEAL6Q6IPX3 200 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 VSTM1Q6UX27 236 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 STXBP4Q6ZWJ1 553 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 SYT13Q7L8C5 426 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 DPH6Q7L8W6 267 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 TCEAL3Q969E4 200 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 ACDQ96AP0 544 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 ZC3H10Q96K80 434 aaKnown RBP13.02□□□□□ -0.33
TPT1-201ENST00000309246 MMS19Q96T76 1030 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 DUSP15Q9H1R2 295 aaPredicted RBP13.02□□□□□ -0.33
TPT1-201ENST00000309246 HSPBP1Q9NZL4 362 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 ARHGAP26Q9UNA1 814 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 PCDHGA5Q9Y5G8 931 aa13.02□□□□□ -0.33
TPT1-201ENST00000309246 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.33
TPT1-201ENST00000309246 MAP1BP46821 2468 aaKnown RBP13.02□□□□□ -0.33
TPT1-201ENST00000309246 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.33
TPT1-201ENST00000309246 CEP192Q8TEP8 1941 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 MYO18AQ92614 2054 aaKnown RBP13.01□□□□□ -0.33
TPT1-201ENST00000309246 ACACBO00763 2458 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 ANTXRLA6NF34 631 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 APBB3O95704 486 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 TCF3P15923 654 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 WARSP23381 471 aaKnown RBP13.01□□□□□ -0.33
TPT1-201ENST00000309246 ANXA13P27216 316 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 HOXD13P35453 343 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 DGKEP52429 567 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 SEC13P55735 322 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 ZXDBP98169 803 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 NR1H3Q13133 447 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 STK38Q15208 465 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 MAPRE1Q15691 268 aaKnown RBP13.01□□□□□ -0.33
TPT1-201ENST00000309246 DUOXA2Q1HG44 320 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 MDH1BQ5I0G3 518 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 STPG1Q5TH74 334 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 DENND5BQ6ZUT9 1274 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 WDR49Q8IV35 697 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 DDX1Q92499 740 aaKnown RBP13.01□□□□□ -0.33
TPT1-201ENST00000309246 PCED1BQ96HM7 432 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 SPATA17Q96L03 361 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 MRPL45Q9BRJ2 306 aaKnown RBP13.01□□□□□ -0.33
TPT1-201ENST00000309246 TNMDQ9H2S6 317 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 TRPM5Q9NZQ8 1165 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 INVSQ9Y283 1065 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 NME7Q9Y5B8 376 aa13.01□□□□□ -0.33
TPT1-201ENST00000309246 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
TPT1-201ENST00000309246 F8VP50 259 aa13□□□□□ -0.33
TPT1-201ENST00000309246 LEFTY2O00292 366 aa13□□□□□ -0.33
TPT1-201ENST00000309246 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
TPT1-201ENST00000309246 TM4SF5O14894 197 aa13□□□□□ -0.33
TPT1-201ENST00000309246 NFATC1O95644 943 aa13□□□□□ -0.33
TPT1-201ENST00000309246 DLATP10515 647 aaKnown RBP13□□□□□ -0.33
TPT1-201ENST00000309246 GBP1P32455 592 aa13□□□□□ -0.33
TPT1-201ENST00000309246 OPRD1P41143 372 aa13□□□□□ -0.33
TPT1-201ENST00000309246 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
TPT1-201ENST00000309246 ASIC1P78348 528 aa13□□□□□ -0.33
TPT1-201ENST00000309246 CREB5Q02930 508 aa13□□□□□ -0.33
TPT1-201ENST00000309246 ELF2Q15723 593 aa13□□□□□ -0.33
TPT1-201ENST00000309246 E2F4Q16254 413 aa13□□□□□ -0.33
TPT1-201ENST00000309246 ST3GAL2Q16842 350 aa13□□□□□ -0.33
TPT1-201ENST00000309246 GAB4Q2WGN9 574 aa13□□□□□ -0.33
TPT1-201ENST00000309246 N4BP2L1Q5TBK1 243 aaPredicted RBP13□□□□□ -0.33
TPT1-201ENST00000309246 HS2ST1Q7LGA3 356 aa13□□□□□ -0.33
TPT1-201ENST00000309246 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
TPT1-201ENST00000309246 RDH13Q8NBN7 331 aa13□□□□□ -0.33
TPT1-201ENST00000309246 TSTD1Q8NFU3 115 aa13□□□□□ -0.33
TPT1-201ENST00000309246 USP33Q8TEY7 942 aa13□□□□□ -0.33
TPT1-201ENST00000309246 CHAMP1Q96JM3 812 aa13□□□□□ -0.33
TPT1-201ENST00000309246 TPSD1Q9BZJ3 242 aa13□□□□□ -0.33
TPT1-201ENST00000309246 TRIM9Q9C026 710 aa13□□□□□ -0.33
TPT1-201ENST00000309246 SNX25Q9H3E2 840 aa13□□□□□ -0.33
TPT1-201ENST00000309246 VPS45Q9NRW7 570 aa13□□□□□ -0.33
TPT1-201ENST00000309246 KBTBD4Q9NVX7 518 aa13□□□□□ -0.33
TPT1-201ENST00000309246 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
TPT1-201ENST00000309246 TRIM66O15016 1216 aa12.99□□□□□ -0.33
TPT1-201ENST00000309246 CLIC2O15247 247 aa12.99□□□□□ -0.33
TPT1-201ENST00000309246 EIF3DO15371 548 aaKnown RBP eCLIP12.99□□□□□ -0.33
TPT1-201ENST00000309246 RHOBTB1O94844 696 aa12.99□□□□□ -0.33
TPT1-201ENST00000309246 ABL1P00519 1130 aa12.99□□□□□ -0.33
TPT1-201ENST00000309246 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
TPT1-201ENST00000309246 CYP17A1P05093 508 aa12.99□□□□□ -0.33
TPT1-201ENST00000309246 TNNI1P19237 187 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms