RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 MTFR1Q15390 333 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 KDM7AQ6ZMT4 941 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 DENND5BQ6ZUT9 1274 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 EFL1Q7Z2Z2 1120 aaKnown RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 SETD3Q86TU7 594 aaPredicted RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 OPTNQ96CV9 577 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 GBA2Q9HCG7 927 aaPredicted RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 KDM4FA0A1W2PPD8 638 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 NKRFO15226 690 aaKnown RBP eCLIP16.55■□□□□ 0.24
USP42-201ENST00000306177 TGM2P21980 687 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 OTUD4Q01804 1114 aaKnown RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 SLFN11Q7Z7L1 901 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 ARMC2Q8NEN0 867 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 L3MBTL3Q96JM7 780 aaPredicted RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 CNPY3Q9BT09 278 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 ARHGAP26Q9UNA1 814 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 GAKO14976 1311 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 CCT8L1PA6NM43 557 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 H7C4K7 107 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 RARGP13631 454 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 RARRES1P49788 294 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 KRT72Q14CN4 511 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 ZRANB3Q5FWF4 1079 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 RPS6KL1Q9Y6S9 549 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 A0A087WZ62 844 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 PMPCBO75439 489 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 RHOBTB1O94844 696 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 FBXO21O94952 628 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 RAP1GAPP47736 663 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 OAZ1P54368 228 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 PTPN11Q06124 597 aaPredicted RBP16.54■□□□□ 0.24
USP42-201ENST00000306177 FAM83EQ2M2I3 478 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 NUP93Q8N1F7 819 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 FBXO36Q8NEA4 188 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 DTX3LQ8TDB6 740 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 TEKT4Q8WW24 435 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 SLC5A5Q92911 643 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 OTUB1Q96FW1 271 aaPredicted RBP16.54■□□□□ 0.24
USP42-201ENST00000306177 RPRD1AQ96P16 312 aaPredicted RBP16.54■□□□□ 0.24
USP42-201ENST00000306177 FDXACB1Q9BRP7 624 aaPredicted RBP16.54■□□□□ 0.24
USP42-201ENST00000306177 AAR2Q9Y312 384 aaKnown RBP16.54■□□□□ 0.24
USP42-201ENST00000306177 SLITRK3O94933 977 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 SPOCD1Q6ZMY3 1216 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 KIF1AQ12756 1690 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 CHRM3P20309 590 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 CNGA3Q16281 694 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 C11orf63Q6NUN7 778 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 C15orf52Q6ZUT6 534 aaKnown RBP16.54■□□□□ 0.24
USP42-201ENST00000306177 OTOP1Q7RTM1 612 aa16.54■□□□□ 0.24
USP42-201ENST00000306177 B2RBV5 119 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 PLSCR1O15162 318 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 YY1P25490 414 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 THTPAQ9BU02 230 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 RIC8BQ9NVN3 520 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 DSEQ9UL01 958 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 USP18Q9UMW8 372 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
USP42-201ENST00000306177 AIM2O14862 343 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 ZBTB17Q13105 803 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 FKBP1CQ5VVH2 108 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 RFWD2Q8NHY2 731 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 MDM1Q8TC05 714 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 SPIRE2Q8WWL2 714 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.53■□□□□ 0.24
USP42-201ENST00000306177 HDAC4P56524 1084 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 RHBDL3P58872 404 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 ZNF177Q13360 481 aaPredicted RBP16.53■□□□□ 0.24
USP42-201ENST00000306177 GRIK5Q16478 980 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 ITGA11Q9UKX5 1188 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 MYOM1P52179 1685 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 SYNDIG1LA6NDD5 238 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 STX7O15400 261 aaKnown RBP16.53■□□□□ 0.24
USP42-201ENST00000306177 THP07101 528 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 LHX1P48742 406 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 SOX10P56693 466 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 CDH18Q13634 790 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 TIGD7Q6NT04 549 aaPredicted RBP16.53■□□□□ 0.24
USP42-201ENST00000306177 ABRAQ8N0Z2 381 aa16.53■□□□□ 0.24
USP42-201ENST00000306177 EPS8L3Q8TE67 593 aaKnown RBP16.53■□□□□ 0.24
USP42-201ENST00000306177 SPDYE5A6NIY4 337 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 SDR42E2A6NKP2 422 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 H0Y626 953 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 CLASP2O75122 1294 aaKnown RBP16.52■□□□□ 0.24
USP42-201ENST00000306177 GLRA3O75311 464 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 ERFP50548 548 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 DNAJC3Q13217 504 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 CCNG2Q16589 344 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 SPDYE7PQ495Y7 208 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 PRPF39Q86UA1 669 aaKnown RBP16.52■□□□□ 0.24
USP42-201ENST00000306177 SNX31Q8N9S9 440 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 TMEM169Q96HH4 297 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 YIPF3Q9GZM5 350 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 SLC4A7Q9Y6M7 1214 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 A0A087X0B3 334 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 H3BRB1 525 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 CXCL8P10145 99 aa16.52■□□□□ 0.24
USP42-201ENST00000306177 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
USP42-201ENST00000306177 USP13Q92995 863 aaPredicted RBP16.52■□□□□ 0.24
USP42-201ENST00000306177 IL17RAQ96F46 866 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms