RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 KBTBD13C9JR72 458 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 MAMLD1Q13495 774 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 BOLA3Q53S33 107 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 RNF43Q68DV7 783 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 GALNT4Q8N4A0 578 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 SEMA4DQ92854 862 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 R3HDM2Q9Y2K5 976 aaKnown RBP13.83□□□□□ -0.2
DDX54-201ENST00000306014 IQCA1LA6NCM1 817 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 HPDLQ96IR7 371 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 ZNF518BQ9C0D4 1074 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 PAPOLBQ9NRJ5 636 aaKnown RBP13.82□□□□□ -0.2
DDX54-201ENST00000306014 MCM8Q9UJA3 840 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 CA8P35219 290 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 CLK2P49760 499 aaKnown RBP13.82□□□□□ -0.2
DDX54-201ENST00000306014 FSD1LQ9BXM9 530 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 CYP39A1Q9NYL5 469 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 RNF103-CHMP3A0A140T963 221 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 PPP1R12AO14974 1030 aaPredicted RBP13.82□□□□□ -0.2
DDX54-201ENST00000306014 LSM8O95777 96 aaKnown RBP13.82□□□□□ -0.2
DDX54-201ENST00000306014 TXNP10599 105 aaKnown RBP13.82□□□□□ -0.2
DDX54-201ENST00000306014 TAC1P20366 129 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 GMPSP49915 693 aaPredicted RBP13.82□□□□□ -0.2
DDX54-201ENST00000306014 TAS2R40P59535 323 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 FAAP100Q0VG06 881 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 KPNB1Q14974 876 aaKnown RBP13.82□□□□□ -0.2
DDX54-201ENST00000306014 DACT2Q5SW24 774 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 IL31RAQ8NI17 732 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 ARFGEF2Q9Y6D5 1785 aa13.82□□□□□ -0.2
DDX54-201ENST00000306014 RASSF9O75901 435 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 SUPT20HL2P0C7V6 817 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 RPL7AP62424 266 aaKnown RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 CCNA1P78396 465 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 TTLL4Q14679 1199 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 IER5Q5VY09 327 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 KDELC2Q7Z4H8 507 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 SLC51AQ86UW1 340 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 LCA5Q86VQ0 697 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 FITM2Q8N6M3 262 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 TMEM161BQ8NDZ6 487 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 FRMD8Q9BZ67 464 aaPredicted RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 SIK2Q9H0K1 926 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 PDP2Q9P2J9 529 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 DNAJC16Q9Y2G8 782 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 RPTORQ8N122 1335 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 ARHGAP10A1A4S6 786 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 SLC34A1Q06495 639 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 MYLK4Q86YV6 388 aaPredicted RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 AGBL3Q8NEM8 1001 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 SCG3Q8WXD2 468 aaKnown RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 INPP5DQ92835 1189 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 SRPK1Q96SB4 655 aaKnown RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 ACTL7BQ9Y614 415 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 KCPQ6ZWJ8 1503 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 LIASO43766 372 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 DNAJC6O75061 913 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 ATP6V1B1P15313 513 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 TCF7P36402 384 aaPredicted RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 CACNA2D1P54289 1103 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 EFTUD2Q15029 972 aaKnown RBP eCLIP13.81□□□□□ -0.22e-8■■■■□ 26.2
DDX54-201ENST00000306014 GOLGA7BQ2TAP0 167 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 ZNF669Q96BR6 464 aaPredicted RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 FRMD8P1Q9BZ68 369 aaPredicted RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 DRC3Q9H069 523 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 TASP1Q9H6P5 420 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 LRCH1Q9Y2L9 728 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 SULT1E1P49888 294 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 RPL10AP62906 217 aaKnown RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 PHEXP78562 749 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 IL1RL1Q01638 556 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 PDK4Q16654 411 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 SLC45A4Q5BKX6 768 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 MFSD5Q6N075 450 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 OXNAD1Q96HP4 312 aaPredicted RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 BEGAINQ9BUH8 593 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 XAB2Q9HCS7 855 aaKnown RBP13.81□□□□□ -0.2
DDX54-201ENST00000306014 GRHL1Q9NZI5 618 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 TAGLN3Q9UI15 199 aa13.81□□□□□ -0.2
DDX54-201ENST00000306014 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
DDX54-201ENST00000306014 HABP4Q5JVS0 413 aaKnown RBP13.8□□□□□ -0.2
DDX54-201ENST00000306014 EFCAB12Q6NXP0 572 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 MTHFD1LQ6UB35 978 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 DENND5BQ6ZUT9 1274 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 RXFP2Q8WXD0 754 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 ATP6V1E2Q96A05 226 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 RMDN2Q96LZ7 410 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.8□□□□□ -0.2
DDX54-201ENST00000306014 PCDHA2Q9Y5H9 948 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
DDX54-201ENST00000306014 A0A1W2PPM1 405 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 POLBP06746 335 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 PTDSS1P48651 473 aaKnown RBP13.8□□□□□ -0.2
DDX54-201ENST00000306014 BTKQ06187 659 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 NBPF20Q3BBV1 942 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 KBTBD12Q3ZCT8 623 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 TMEM259Q4ZIN3 620 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 CPNE8Q86YQ8 564 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms