RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MRPL45Q9BRJ2 306 aaKnown RBP23.03■■□□□ 1.28
TPM4-201ENST00000300933 ABCF3Q9NUQ8 709 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 SAMD15Q9P1V8 674 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.03■■□□□ 1.28
TPM4-201ENST00000300933 SLC12A4Q9UP95 1085 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 SIGLEC16A6NMB1 481 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 RGS16O15492 202 aaPredicted RBP23.02■■□□□ 1.28
TPM4-201ENST00000300933 NRLP54845 237 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 EIF3BP55884 814 aaKnown RBP23.02■■□□□ 1.28
TPM4-201ENST00000300933 SLMAPQ14BN4 828 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 HOOK3Q86VS8 718 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 GRK7Q8WTQ7 553 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 ATXN2LQ8WWM7 1075 aaKnown RBP23.02■■□□□ 1.28
TPM4-201ENST00000300933 ADAMTS10Q9H324 1103 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 CDKN2BP42772 138 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 RBP5P82980 135 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 CAPN12Q6ZSI9 719 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 RBM41Q96IZ5 413 aaKnown RBP23.02■■□□□ 1.28
TPM4-201ENST00000300933 LHX5Q9H2C1 402 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 INTS9Q9NV88 658 aaKnown RBP23.02■■□□□ 1.28
TPM4-201ENST00000300933 TSPAN16Q9UKR8 245 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 NME7Q9Y5B8 376 aa23.02■■□□□ 1.28
TPM4-201ENST00000300933 hCG_1818297A0A087WSY0 165 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 IGF2BP3O00425 579 aaKnown RBP eCLIP23.01■■□□□ 1.27
TPM4-201ENST00000300933 TJP3O95049 919 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 CYP2C9P11712 490 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 C15orf59Q2T9L4 293 aaPredicted RBP23.01■■□□□ 1.27
TPM4-201ENST00000300933 TFDP3Q5H9I0 405 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 TRPM8Q7Z2W7 1104 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 ADAM7Q9H2U9 754 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 E5RJQ4 531 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 TREHO43280 583 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 GPR32O75388 356 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 CREB1P16220 341 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 KCNJ2P63252 427 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 IQSEC1Q6DN90 963 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 TRNP1Q6NT89 227 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 TAX1BP1Q86VP1 789 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 RNF39Q9H2S5 420 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 GOLGA2P5Q9HBQ8 144 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 SLC45A1Q9Y2W3 748 aa23.01■■□□□ 1.27
TPM4-201ENST00000300933 GOLGA8MH3BSY2 632 aa23■■□□□ 1.27
TPM4-201ENST00000300933 RASGRF2O14827 1237 aa23■■□□□ 1.27
TPM4-201ENST00000300933 GBP1P32455 592 aa23■■□□□ 1.27
TPM4-201ENST00000300933 CETN2P41208 172 aa23■■□□□ 1.27
TPM4-201ENST00000300933 ARSEP51690 589 aa23■■□□□ 1.27
TPM4-201ENST00000300933 HUNKP57058 714 aa23■■□□□ 1.27
TPM4-201ENST00000300933 SLC25A11Q02978 314 aaKnown RBP23■■□□□ 1.27
TPM4-201ENST00000300933 ADCY1Q08828 1119 aa23■■□□□ 1.27
TPM4-201ENST00000300933 PPP1R26Q5T8A7 1209 aaPredicted RBP23■■□□□ 1.27
TPM4-201ENST00000300933 OR6B2Q6IFH4 312 aa23■■□□□ 1.27
TPM4-201ENST00000300933 CYP4F22Q6NT55 531 aa23■■□□□ 1.27
TPM4-201ENST00000300933 AGAP11Q8TF27 550 aa23■■□□□ 1.27
TPM4-201ENST00000300933 CENPTQ96BT3 561 aa23■■□□□ 1.27
TPM4-201ENST00000300933 TBK1Q9UHD2 729 aa23■■□□□ 1.27
TPM4-201ENST00000300933 STRIP2Q9ULQ0 834 aa23■■□□□ 1.27
TPM4-201ENST00000300933 BARX2Q9UMQ3 279 aaPredicted RBP23■■□□□ 1.27
TPM4-201ENST00000300933 KLRC2P26717 231 aa23■■□□□ 1.27
TPM4-201ENST00000300933 PPP1R2P3Q6NXS1 205 aa23■■□□□ 1.27
TPM4-201ENST00000300933 PIGWQ7Z7B1 504 aa23■■□□□ 1.27
TPM4-201ENST00000300933 TLK2Q86UE8 772 aa23■■□□□ 1.27
TPM4-201ENST00000300933 TRAIPQ9BWF2 469 aa23■■□□□ 1.27
TPM4-201ENST00000300933 COL1A2P08123 1366 aa23■■□□□ 1.27
TPM4-201ENST00000300933 C3orf70A6NLC5 250 aaPredicted RBP22.99■■□□□ 1.27
TPM4-201ENST00000300933 CST8O60676 142 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 PDGFRBP09619 1106 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 ATP11AP98196 1134 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 GPS1Q13098 491 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 MMRN1Q13201 1228 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 C7orf31Q8N865 590 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 PRCCQ92733 491 aaPredicted RBP22.99■■□□□ 1.27
TPM4-201ENST00000300933 SCN4AP35499 1836 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 SGK1O00141 431 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 MIPP30301 263 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 MMP13P45452 471 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 AUHQ13825 339 aaKnown RBP22.99■■□□□ 1.27
TPM4-201ENST00000300933 LRRN4Q8WUT4 740 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 CALN1Q9BXU9 219 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 B3GNT5Q9BYG0 378 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 DPEP3Q9H4B8 488 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 ITGA11Q9UKX5 1188 aa22.99■■□□□ 1.27
TPM4-201ENST00000300933 MYL3P08590 195 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 P4HA1P13674 534 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 ATICP31939 592 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 GDF10P55107 478 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 CNGA2Q16280 664 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 SYCP2LQ5T4T6 812 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 SCUBE3Q8IX30 993 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 CCDC89Q8N998 374 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 ADAM33Q9BZ11 813 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 GCOM2Q9BZD3 368 aaPredicted RBP22.98■■□□□ 1.27
TPM4-201ENST00000300933 EBF2Q9HAK2 575 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 PIN4Q9Y237 131 aaKnown RBP22.98■■□□□ 1.27
TPM4-201ENST00000300933 HGSO14964 777 aaPredicted RBP22.98■■□□□ 1.27
TPM4-201ENST00000300933 BANF1O75531 89 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 UBOX5O94941 541 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 PFKMP08237 780 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 GRM5P41594 1212 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 SATB1Q01826 763 aa22.98■■□□□ 1.27
TPM4-201ENST00000300933 GAD2Q05329 585 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms