RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 HMG20AQ9NP66 347 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 LRRC7Q96NW7 1537 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 ZNF23P17027 643 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 PPIDQ08752 370 aaKnown RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 TRMT2AQ8IZ69 625 aaKnown RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 RIN2Q8WYP3 895 aaPredicted RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 RAD18Q9NS91 495 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SNRPAP09012 282 aaKnown RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 AP1S2P56377 157 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 PTGISQ16647 500 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 PRMT9Q6P2P2 845 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 C11orf88Q6PI97 169 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 RASGRP2Q7LDG7 609 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 C1orf50Q9BV19 199 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 PDXKO00764 312 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 C21orf2O43822 256 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 FMR1Q06787 632 aaKnown RBP eCLIP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SUSD4Q5VX71 490 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 LRRC8DQ7L1W4 858 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 MB21D2Q8IYB1 491 aaPredicted RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 PGBD3Q8N328 593 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 GUF1Q8N442 669 aaKnown RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 S100ZQ8WXG8 99 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 NMD3Q96D46 503 aaKnown RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 THUMPD3Q9BV44 507 aaKnown RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 HDHD2Q9H0R4 259 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 LSM7Q9UK45 103 aaKnown RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SNX13Q9Y5W8 968 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 TRPC5OSA6NMA1 111 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SKAP2O75563 359 aaPredicted RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 EPB42P16452 691 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 CHRM3P20309 590 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 RFX3P48380 749 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 ACOT2P49753 483 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 TMEM62Q0P6H9 643 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 HIST2H2ACQ16777 129 aaPredicted RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 HIST2H2AA3Q6FI13 130 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 C19orf18Q8NEA5 215 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 KRT35Q92764 455 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 TMCO1Q9UM00 188 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SH3GLB1Q9Y371 365 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 CFAP99D6REC4 459 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 EYA4O95677 639 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 GPD1P21695 349 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 FAM71DQ8N9W8 422 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 RPRD1BQ9NQG5 326 aaKnown RBP5.76□□□□□ -1.49
CPSF2-201ENST00000298875 RNF146Q9NTX7 359 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SPASTQ9UBP0 616 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 HAO1Q9UJM8 370 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SLC30A1Q9Y6M5 507 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 VWDEQ8N2E2 1590 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SLC26A4O43511 780 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 MYBP10242 640 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 TGFB2P61812 414 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 XIAPP98170 497 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 C2orf69Q8N8R5 385 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 VPS37AQ8NEZ2 397 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 CENPTQ96BT3 561 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 SPATA31D1Q6ZQQ2 1576 aa5.76□□□□□ -1.49
CPSF2-201ENST00000298875 CEP152O94986 1710 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 POLRMTO00411 1230 aaKnown RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 KRT20P35900 424 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 PRIM2P49643 509 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 RBP5P82980 135 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 PTK6Q13882 451 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 ACAP2Q15057 778 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 ZCWPW2Q504Y3 356 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 DGKKQ5KSL6 1271 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 CACHD1Q5VU97 1274 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 DENND5BQ6ZUT9 1274 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 VN1R5Q7Z5H4 357 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 JAMLQ86YT9 394 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 SEPT1Q8WYJ6 367 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 MED15Q96RN5 788 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 SPRTNQ9H040 489 aaPredicted RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 DCLRE1BQ9H816 532 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 MOV10Q9HCE1 1003 aaKnown RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 COL15A1P39059 1388 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 HEATR9A2RTY3 570 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 CARNS1A5YM72 827 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 TGM2P21980 687 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 GUCY1A2P33402 732 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 SARSP49591 514 aaKnown RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 CSNK2BP67870 215 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 GPSM2P81274 684 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 RGS21Q2M5E4 152 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 FAM182BQ5T319 152 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 CRELD2Q6UXH1 353 aaPredicted RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 FOXP4Q8IVH2 680 aaPredicted RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 MASTLQ96GX5 879 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 PDCD10Q9BUL8 212 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 CINPQ9BW66 212 aaPredicted RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 FHDC1Q9C0D6 1143 aaPredicted RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 MTFR1LQ9H019 292 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 TRMT6Q9UJA5 497 aaKnown RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 IPPQ9Y573 584 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 CLTCQ00610 1675 aaKnown RBP5.75□□□□□ -1.49
CPSF2-201ENST00000298875 TPST1O60507 370 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 PDGFRBP09619 1106 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms