RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DENND2DQ9H6A0 471 aaPredicted RBP25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 ACSS3Q9H6R3 686 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 GPATCH2LQ9NWQ4 482 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 SENP1Q9P0U3 644 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 SIGLEC16A6NMB1 481 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 KBTBD13C9JR72 458 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 PHBP35232 272 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 RAD23BP54727 409 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 PRPF39Q86UA1 669 aaKnown RBP25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 PDIK1LQ8N165 341 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 MIPEPQ99797 713 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 HEY2Q9UBP5 337 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 NFICP08651 508 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 BGNP21810 368 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 HADHQ16836 314 aaKnown RBP25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 DARS2Q6PI48 645 aaKnown RBP25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 BBS12Q6ZW61 710 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 XYLT1Q86Y38 959 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 MANSC1Q9H8J5 431 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 MINDY3Q9H8M7 445 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 CYLDQ9NQC7 956 aa25.52■■□□□ 1.68
SPTSSA-201ENST00000298130 MAFO75444 373 aaPredicted RBP25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 ARIH2O95376 493 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 PYGBP11216 843 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 ZNF280AP59817 542 aaPredicted RBP25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 DPYSL3Q14195 570 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 TAF11Q15544 211 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 CLNKQ7Z7G1 428 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 TTC7BQ86TV6 843 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 NCAPG2Q86XI2 1143 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 BANPQ8N9N5 519 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 ABLIM1O14639 778 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 LPXNO60711 386 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 MT-ND3P03897 115 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 OAZ1P54368 228 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 PTK7Q13308 1070 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 ZPBP2Q6X784 338 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 RGS9BPQ6ZS82 235 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 CTAGE3PQ8IX95 158 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 AGGF1Q8N302 714 aaeCLIP25.51■■□□□ 1.674e-7■■■■□ 22.6
SPTSSA-201ENST00000298130 NIPA2Q8N8Q9 360 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 ARL8BQ9NVJ2 186 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 KCNG1Q9UIX4 513 aa25.51■■□□□ 1.67
SPTSSA-201ENST00000298130 TCRBV9S1A1TA0A576 114 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 ABCD1P33897 745 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 CLCN3P51790 818 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 FAM102AQ5T9C2 384 aaPredicted RBP25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 FYB2Q5VWT5 728 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 DCAF15Q66K64 600 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 RFX8Q6ZV50 586 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 BTBD7Q9P203 1132 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 USP18Q9UMW8 372 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 PCDHGC3Q9UN70 934 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 IGKV6D-21A0A0A0MT36 114 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 ZWINTO95229 277 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 PGK2P07205 417 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 KRT7P08729 469 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 CDH6P55285 790 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 YWHAEP62258 255 aaKnown RBP25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 MICAL1Q8TDZ2 1067 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 MECRQ9BV79 373 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 ZNF395Q9H8N7 513 aaPredicted RBP25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 SIX4Q9UIU6 781 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 RGPD3A6NKT7 1758 aaPredicted RBP25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 RGPD4Q7Z3J3 1758 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 SOWAHBA6NEL2 793 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 M0QYV0 167 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 NFKBIEO00221 500 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 TNNC2P02585 160 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 IQCF3P0C7M6 154 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 SERPINB3P29508 390 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 PTPN7P35236 360 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 IGBP1P78318 339 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 SMAD1Q15797 465 aaKnown RBP25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 CDHR3Q6ZTQ4 885 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 ZNF518BQ9C0D4 1074 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 ELOVL4Q9GZR5 314 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 ARMCX1Q9P291 453 aa25.5■■□□□ 1.67
SPTSSA-201ENST00000298130 RLFQ13129 1914 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 F5H423 210 aaPredicted RBP25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 MCF2LO15068 1137 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 ITGB3P05106 788 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 RFC5P40937 340 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 CPA2P48052 419 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 PCGF5Q86SE9 256 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 COPS5Q92905 334 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 RNPEPL1Q9HAU8 725 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 HEY1Q9Y5J3 304 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 H7C0C1 242 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 POLR2BP30876 1174 aaKnown RBP25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 CDH5P33151 784 aaPredicted RBP25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 ABL2P42684 1182 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 ATP5OP48047 213 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 TRNP1Q6NT89 227 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 SCYL2Q6P3W7 929 aa25.49■■□□□ 1.67
SPTSSA-201ENST00000298130 UGT1A9O60656 530 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 MICAL2O94851 1124 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 CRYMQ14894 314 aa25.48■■□□□ 1.67
SPTSSA-201ENST00000298130 CTC1Q2NKJ3 1217 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms