RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PREBQ9HCU5 417 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 DNAAF2Q9NVR5 837 aaKnown RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 ZC3H11AO75152 810 aaKnown RBP eCLIP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 MCCD1P59942 119 aaPredicted RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 NFX1Q12986 1120 aaKnown RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 CYP4A22Q5TCH4 519 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 OTOAQ7RTW8 1153 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 TRABD2AQ86V40 505 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 RBM12BQ8IXT5 1001 aaKnown RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 WDR60Q8WVS4 1066 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 OTUD5Q96G74 571 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 NR1H4Q96RI1 486 aaPredicted RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 NPHS2Q9NP85 383 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 GALNT8Q9NY28 637 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 MAP3K20Q9NYL2 800 aaKnown RBP16.32■□□□□ 0.2
UBAP1-201ENST00000297661 PPP2R3BQ9Y5P8 575 aa16.32■□□□□ 0.2
UBAP1-201ENST00000297661 IFNB1P01574 187 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 KRT1P04264 644 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 DYNLT1P63172 113 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 OGDHQ02218 1023 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 PTP4A2Q12974 167 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 NCOA4Q13772 614 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 CCNG2Q16589 344 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF606Q8WXB4 792 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 FAM81BQ96LP2 452 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 SENP7Q9BQF6 1050 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 SLC4A7Q9Y6M7 1214 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 WASF2Q9Y6W5 498 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 SUPT20HL2P0C7V6 817 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 MAGEA4P43358 317 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 RTP1P59025 263 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 BPIFB4P59827 614 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF252P-AS1Q0IIN9 211 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 PLEKHG4Q58EX7 1191 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 DCAF15Q66K64 600 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 EEPD1Q7L9B9 569 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 REPS2Q8NFH8 660 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBAP1-201ENST00000297661 MCUR1Q96AQ8 359 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 TRIM11Q96F44 468 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF212Q9UDV6 495 aa16.31■□□□□ 0.2
UBAP1-201ENST00000297661 GYG2O15488 501 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 WEE2P0C1S8 567 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ETS2P15036 469 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 KLRC2P26717 231 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 RPA3P35244 121 aaPredicted RBP16.3■□□□□ 0.2
UBAP1-201ENST00000297661 PLCB3Q01970 1234 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 GAD2Q05329 585 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 GPS1Q13098 491 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 XKR3Q5GH77 459 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 SAPCD2Q86UD0 394 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 LCA5Q86VQ0 697 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 CDR2LQ86X02 465 aaPredicted RBP16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF677Q86XU0 584 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 KATNAL2Q8IYT4 538 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 C4orf33Q8N1A6 199 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 CCDC89Q8N998 374 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 FEZF2Q8TBJ5 459 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 PLEKHG4BQ96PX9 1271 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 TUBGCP5Q96RT8 1024 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ZIC5Q96T25 663 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 TCHPQ9BT92 498 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 MTMR12Q9C0I1 747 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ASCC2Q9H1I8 757 aaPredicted RBP16.3■□□□□ 0.2
UBAP1-201ENST00000297661 TRABDQ9H4I3 376 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 CYLDQ9NQC7 956 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF302Q9NR11 478 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ARL8BQ9NVJ2 186 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 DCTN4Q9UJW0 460 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 PSTPIP1O43586 416 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ZWINTO95229 277 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 FGFR1P11362 822 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 MAN1A1P33908 653 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 IREB2P48200 963 aaKnown RBP16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ARSEP51690 589 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 OSTNP61366 133 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 CLDN10P78369 228 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 ORC1Q13415 861 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 SMTNL2Q2TAL5 461 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 LIN52Q52LA3 116 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 PLEKHA7Q6IQ23 1121 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 TMEM121Q9BTD3 319 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 MRPL47Q9HD33 250 aaKnown RBP16.3■□□□□ 0.2
UBAP1-201ENST00000297661 TJP2Q9UDY2 1190 aa16.3■□□□□ 0.2
UBAP1-201ENST00000297661 PRPF4O43172 522 aaKnown RBP eCLIP16.29■□□□□ 0.21e-7■■■■■ 30.3
UBAP1-201ENST00000297661 PENKP01210 267 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-201ENST00000297661 CA4P22748 312 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 SLC1A5Q15758 541 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 FYB2Q5VWT5 728 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 SYDE1Q6ZW31 735 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-201ENST00000297661 ANKMY2Q8IV38 441 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF280CQ8ND82 737 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 HAPLN3Q96S86 360 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 TMCO1Q9UM00 188 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 COL11A1P12107 1806 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-201ENST00000297661 CNTNAP2Q9UHC6 1331 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms