RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 RNF103-CHMP3A0A140T963 221 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 CD4P01730 458 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 CALB2P22676 271 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 CHKAP35790 457 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 RRP1BQ14684 758 aaKnown RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 KDELC2Q7Z4H8 507 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 E2F7Q96AV8 911 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 WHRNQ9P202 907 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 MTO1Q9Y2Z2 717 aaKnown RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 FAM86B1E9PN63 330 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 XPO1O14980 1071 aaKnown RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 LRG1P02750 347 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 AKR1A1P14550 325 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 AP3M2P53677 418 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 INHBEP58166 350 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 NCALDP61601 193 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 DLG4P78352 724 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 POU5F1BQ06416 359 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 FOXD4Q12950 439 aaPredicted RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 RNF135Q8IUD6 432 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 C1orf131Q8NDD1 294 aaKnown RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 SYTL5Q8TDW5 730 aaPredicted RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 HASPINQ8TF76 798 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 STK32AQ8WU08 396 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 TBC1D10AQ9BXI6 508 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 SARS2Q9NP81 518 aaKnown RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 PCDHAC2Q9Y5I4 1007 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 EIF3DO15371 548 aaKnown RBP eCLIP13.98□□□□□ -0.17
HPS3-201ENST00000296051 PTPN4P29074 926 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 SHMT1P34896 483 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 BMPR2Q13873 1038 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 AMHR2Q16671 573 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 TMEM119Q4V9L6 283 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 IYDQ6PHW0 289 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 POU5F2Q8N7G0 328 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 SCG3Q8WXD2 468 aaKnown RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 RMDN1Q96DB5 314 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 TMA16Q96EY4 203 aaKnown RBP13.98□□□□□ -0.17
HPS3-201ENST00000296051 SH3BP1Q9Y3L3 701 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
HPS3-201ENST00000296051 NOL4O94818 638 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 PECAM1P16284 738 aaPredicted RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 BRD2P25440 801 aaKnown RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 GTF2H1P32780 548 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 PPARGP37231 505 aaPredicted RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 LAMB3Q13751 1172 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 DUPD1Q68J44 220 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 DCP1BQ8IZD4 617 aaKnown RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 ARHGAP18Q8N392 663 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 TTC8Q8TAM2 541 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 TCP10LQ8TDR4 215 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 PAFAH2Q99487 392 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 EFHD1Q9BUP0 239 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 TMEM120AQ9BXJ8 343 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 MYO5BQ9ULV0 1848 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 PTPRAP18433 802 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 KPNB1Q14974 876 aaKnown RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 RMDN2Q96LZ7 410 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 CCDC138Q96M89 665 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 SLITRK1Q96PX8 696 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 COLEC11Q9BWP8 271 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 VPS33BQ9H267 617 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 CYP26B1Q9NR63 512 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 MAGEA13PA6NCF6 341 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 VWA5AO00534 786 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 ATP9BO43861 1147 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 RASA2Q15283 850 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 IL31Q6EBC2 164 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 LRRC6Q86X45 466 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 PPP1R13LQ8WUF5 828 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 VPS39Q96JC1 886 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 UNC45AQ9H3U1 944 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 RNPEPL1Q9HAU8 725 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 SAE1Q9UBE0 346 aaPredicted RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 VIL1P09327 827 aaKnown RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 ETS1P14921 441 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 STX1BP61266 288 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 BEX3Q00994 111 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 ZNF235Q14590 738 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 NPY5RQ15761 445 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 CCDC157Q569K6 752 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 FSCBQ5H9T9 825 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 FEZF2Q8TBJ5 459 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 ATXN2LQ8WWM7 1075 aaKnown RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 SPOCK2Q92563 424 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 TIPINQ9BVW5 301 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 WARS2Q9UGM6 360 aaKnown RBP13.97□□□□□ -0.17
HPS3-201ENST00000296051 C2CD2Q9Y426 696 aa13.97□□□□□ -0.17
HPS3-201ENST00000296051 PYGBP11216 843 aa13.96□□□□□ -0.17
HPS3-201ENST00000296051 ACADSP16219 412 aa13.96□□□□□ -0.17
HPS3-201ENST00000296051 AQP5P55064 265 aa13.96□□□□□ -0.17
HPS3-201ENST00000296051 GPAT2Q6NUI2 795 aa13.96□□□□□ -0.17
HPS3-201ENST00000296051 ENOSF1Q7L5Y1 443 aa13.96□□□□□ -0.17
HPS3-201ENST00000296051 PALB2Q86YC2 1186 aa13.96□□□□□ -0.17
HPS3-201ENST00000296051 OR6P1Q8NGX9 317 aa13.96□□□□□ -0.17
HPS3-201ENST00000296051 PURBQ96QR8 312 aaKnown RBP13.96□□□□□ -0.17
HPS3-201ENST00000296051 TMEM8AQ9HCN3 771 aa13.96□□□□□ -0.17
HPS3-201ENST00000296051 ASMTLO95671 621 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms