RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 HIBCHQ6NVY1 386 aaPredicted RBP20.02■□□□□ 0.79
SHF-201ENST00000290894 SCYL2Q6P3W7 929 aa20.02■□□□□ 0.79
SHF-201ENST00000290894 FNIP1Q8TF40 1166 aa20.02■□□□□ 0.79
SHF-201ENST00000290894 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.02■□□□□ 0.79
SHF-201ENST00000290894 GPATCH2LQ9NWQ4 482 aa20.02■□□□□ 0.79
SHF-201ENST00000290894 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.02■□□□□ 0.79
SHF-201ENST00000290894 SMIM35A0A1B0GVV1 85 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 SPTLC1O15269 473 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 MAP3K6O95382 1288 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 CCDC130P13994 396 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 SYCP2LQ5T4T6 812 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 NPNTQ6UXI9 565 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 SAYSD1Q9NPB0 183 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 A8MXQ7 604 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 TRUB2O95900 331 aaKnown RBP20.01■□□□□ 0.79
SHF-201ENST00000290894 IGFBP6P24592 240 aaPredicted RBP20.01■□□□□ 0.79
SHF-201ENST00000290894 ADORA2BP29275 332 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 SOX4Q06945 474 aaPredicted RBP20.01■□□□□ 0.79
SHF-201ENST00000290894 ZBTB6Q15916 424 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 QPCTQ16769 361 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 C9orf57Q5W0N0 161 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 BEST2Q8NFU1 509 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 CLEC4CQ8WTT0 213 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 LRRN4Q8WUT4 740 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 FAXDC2Q96IV6 333 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 FAM129AQ9BZQ8 928 aa20.01■□□□□ 0.79
SHF-201ENST00000290894 NGRNQ9NPE2 291 aaKnown RBP20.01■□□□□ 0.79
SHF-201ENST00000290894 SMIM28A0A1B0GU29 152 aa20■□□□□ 0.79
SHF-201ENST00000290894 MYADML2A6NDP7 307 aa20■□□□□ 0.79
SHF-201ENST00000290894 MYO1CO00159 1063 aa20■□□□□ 0.79
SHF-201ENST00000290894 GPD1P21695 349 aa20■□□□□ 0.79
SHF-201ENST00000290894 ZNF143P52747 638 aaPredicted RBP20■□□□□ 0.79
SHF-201ENST00000290894 LMNB2Q03252 620 aa20■□□□□ 0.79
SHF-201ENST00000290894 NT5DC4Q86YG4 428 aa20■□□□□ 0.79
SHF-201ENST00000290894 PLEKHA5Q9HAU0 1116 aa20■□□□□ 0.79
SHF-201ENST00000290894 C2CD4BA6NLJ0 364 aa20■□□□□ 0.79
SHF-201ENST00000290894 DNALI1O14645 258 aaPredicted RBP20■□□□□ 0.79
SHF-201ENST00000290894 GABBR2O75899 941 aa20■□□□□ 0.79
SHF-201ENST00000290894 TFE3P19532 575 aaPredicted RBP20■□□□□ 0.79
SHF-201ENST00000290894 IBSPP21815 317 aaPredicted RBP20■□□□□ 0.79
SHF-201ENST00000290894 IFNAR2P48551 515 aa20■□□□□ 0.79
SHF-201ENST00000290894 CDH6P55285 790 aa20■□□□□ 0.79
SHF-201ENST00000290894 CAV1Q03135 178 aa20■□□□□ 0.79
SHF-201ENST00000290894 RASAL3Q86YV0 1011 aa20■□□□□ 0.79
SHF-201ENST00000290894 C10orf67Q8IYJ2 551 aa20■□□□□ 0.79
SHF-201ENST00000290894 ARRDC4Q8NCT1 418 aa20■□□□□ 0.79
SHF-201ENST00000290894 SLC35B2Q8TB61 432 aa20■□□□□ 0.79
SHF-201ENST00000290894 MGARPQ8TDB4 240 aa20■□□□□ 0.79
SHF-201ENST00000290894 ADAM33Q9BZ11 813 aa20■□□□□ 0.79
SHF-201ENST00000290894 MLXIPLQ9NP71 852 aa20■□□□□ 0.79
SHF-201ENST00000290894 GMNCA6NCL1 334 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 TRAPPC3O43617 180 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 FGFR1P11362 822 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 MAGEA4P43358 317 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 MMP13P45452 471 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 EXOC3L1Q86VI1 746 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 ZC3H18Q86VM9 953 aaKnown RBP19.99■□□□□ 0.79
SHF-201ENST00000290894 CYP4X1Q8N118 509 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 MRRFQ96E11 262 aaKnown RBP19.99■□□□□ 0.79
SHF-201ENST00000290894 AP5M1Q9H0R1 490 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 ASNSD1Q9NWL6 643 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 AGTP01019 485 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 PTPN7P35236 360 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 ADAM17P78536 824 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 LRRC14Q15048 493 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 DRICH1Q6PGQ1 229 aaPredicted RBP19.99■□□□□ 0.79
SHF-201ENST00000290894 ALKAL1Q6UXT8 129 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 CYP4V2Q6ZWL3 525 aaPredicted RBP19.99■□□□□ 0.79
SHF-201ENST00000290894 NKD2Q969F2 451 aaPredicted RBP19.99■□□□□ 0.79
SHF-201ENST00000290894 ZFP42Q96MM3 310 aa19.99■□□□□ 0.79
SHF-201ENST00000290894 TPX2Q9ULW0 747 aaKnown RBP19.99■□□□□ 0.79
SHF-201ENST00000290894 MEIS3P2A8K0S8 358 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 PIAS1O75925 651 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 STAU1O95793 577 aaKnown RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 FAM107AO95990 144 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 MYCNP04198 464 aaPredicted RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 C6orf222P0C671 652 aaPredicted RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 CCDC14Q49A88 953 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 ZC3H12AQ5D1E8 599 aaKnown RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 FBXO47Q5MNV8 452 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 UNC45BQ8IWX7 931 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 ZCCHC9Q8N567 271 aaKnown RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 FAM71DQ8N9W8 422 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 BBOF1Q8ND07 529 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 CNPY3Q9BT09 278 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 CNTN3Q9P232 1028 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 FAM169AQ9Y6X4 670 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 PAPSS1O43252 624 aaPredicted RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 ITGAVP06756 1048 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 CPT1AP50416 773 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 GSCP56915 257 aaPredicted RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 FSCN1Q16658 493 aaKnown RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 ANKRD22Q5VYY1 191 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 TWF2Q6IBS0 349 aaKnown RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 OLFML1Q6UWY5 402 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 BBS12Q6ZW61 710 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 CMASQ8NFW8 434 aaPredicted RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 ARHGEF2Q92974 986 aaKnown RBP19.98■□□□□ 0.79
SHF-201ENST00000290894 TMEM109Q9BVC6 243 aa19.98■□□□□ 0.79
SHF-201ENST00000290894 MAGEB5Q9BZ81 275 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms