RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 BTBD7Q9P203 1132 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 HEY2Q9UBP5 337 aa11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 PRG3Q9Y2Y8 225 aaPredicted RBP11.85□□□□□ -0.51
NPC1L1-201ENST00000289547 TBKBP1A7MCY6 615 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 SPATA31C2B4DYI2 1134 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 ZNF189O75820 626 aaPredicted RBP11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 SLURP2P0DP57 97 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 GRIK1P39086 918 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 VEGFBP49765 207 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 ARSEP51690 589 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 TTMPQ5BVD1 217 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 KLC3Q6P597 504 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 C10orf88Q9H8K7 445 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 TBX20Q9UMR3 447 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 A0A087WZ62 844 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 ALDH2P05091 517 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 SOX5P35711 763 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 LAMTOR4Q0VGL1 99 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 RNF217Q8TC41 542 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 FDXACB1Q9BRP7 624 aaPredicted RBP11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 LOC100653049A0A140TA62 436 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 OGTO15294 1046 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 KRT34O76011 436 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 CLPTM1O96005 669 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 SNHG28P0DPA3 235 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 HSD17B4P51659 736 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 MPP4Q96JB8 637 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 SERPINB12Q96P63 405 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 ERGIC2Q96RQ1 377 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 C11orf70Q9BRQ4 267 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 OSBPL8Q9BZF1 889 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 LSM7Q9UK45 103 aaKnown RBP11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 DSEQ9UL01 958 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 DTNAQ9Y4J8 743 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 SNX9Q9Y5X1 595 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 CYTH3O43739 400 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 ACOT2P49753 483 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 ITGA7Q13683 1181 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 HIF1AQ16665 826 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 IRGCQ6NXR0 463 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 STKLD1Q8NE28 680 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 DDX18Q9NVP1 670 aaKnown RBP11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 STAP1Q9ULZ2 295 aa11.84□□□□□ -0.51
NPC1L1-201ENST00000289547 DYTNA2CJ06 578 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 THP07101 528 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 MRPS6P82932 125 aaKnown RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 TMEM270Q6UE05 265 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 CNBD2Q96M20 576 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 TARS2Q9BW92 718 aaKnown RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 MARF1Q9Y4F3 1742 aaKnown RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 KPNA7A9QM74 516 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 FAM86B1E9PN63 330 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 ZC3H11AO75152 810 aaKnown RBP eCLIP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 FAM86B2P0C5J1 330 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF18P17022 549 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 NNMTP40261 264 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 ITKQ08881 620 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 PTPAQ15257 358 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 SNRNP35Q16560 246 aaKnown RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 KIF19Q2TAC6 998 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 WDR72Q3MJ13 1102 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 CRELD2Q6UXH1 353 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 TRIM67Q6ZTA4 783 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 ELOA2Q8IYF1 753 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 FBXO25Q8TCJ0 367 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 LZICQ8WZA0 190 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 UCHL3P15374 230 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 CALB2P22676 271 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 TBX2Q13207 712 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 IYDQ6PHW0 289 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 PRPF39Q86UA1 669 aaKnown RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 FAM81AQ8TBF8 368 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 EMILIN2Q9BXX0 1053 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 KLC2Q9H0B6 622 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 C11orf49Q9H6J7 331 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 PSMC3IPQ9P2W1 217 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 RBPJLQ9UBG7 517 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 MED24O75448 989 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 E2F6O75461 281 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 ENO3P13929 434 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 CCNHP51946 323 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 MYLK4Q86YV6 388 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 CCNYL1Q8N7R7 359 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF483Q8TF39 744 aaPredicted RBP11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 STK32AQ8WU08 396 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 HIPK3Q9H422 1215 aa11.83□□□□□ -0.52
NPC1L1-201ENST00000289547 A0A087X0T9 212 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 MYMKA6NI61 221 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 FAM228BP0C875 321 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 TRIM49P0CI25 452 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 TRIM49CP0CI26 452 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF844Q08AG5 666 aa11.82□□□□□ -0.52
NPC1L1-201ENST00000289547 KCTD21Q4G0X4 260 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms