RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 REXO2Q9Y3B8 237 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 E7EVH7 732 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 XPO1O14980 1071 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 BMPR1AP36894 532 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 TAP1Q03518 808 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 NFE2Q16621 373 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 GOLGA7BQ2TAP0 167 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 TPGS2Q68CL5 300 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 SLC8B1Q6J4K2 584 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ALKBH5Q6P6C2 394 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 GLYCTKQ8IVS8 523 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 TFAP2BQ92481 460 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ELMO3Q96BJ8 720 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 SMARCD1Q96GM5 515 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 TMEM169Q96HH4 297 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 PCDHB18PQ96TA0 734 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ZSWIM1Q9BR11 485 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 WDR35Q9P2L0 1181 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 PYCARDQ9ULZ3 195 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 IRAK3Q9Y616 596 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 KNTC1P50748 2209 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 A0A087X0T9 212 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 CYP1A2P05177 515 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 FAM228BP0C875 321 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ITKQ08881 620 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 CFAP221Q4G0U5 840 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 FAM171A1Q5VUB5 890 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 TAB3Q8N5C8 712 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 DUSP16Q9BY84 665 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 GPR62Q9BZJ7 368 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 UBE2OQ9C0C9 1292 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 DPEP3Q9H4B8 488 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 CRTAC1Q9NQ79 661 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 SPTLC3Q9NUV7 552 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 TMEM51Q9NW97 253 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 HESX1Q9UBX0 185 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 TSPAN16Q9UKR8 245 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 CEP250Q9BV73 2442 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 TLDC2A0PJX2 215 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 LINC01553A4QN01 128 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ZNF263O14978 683 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 LMO2P25791 158 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 NSFP46459 744 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 UAP1Q16222 522 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 CCDC122Q5T0U0 273 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 KIAA0319Q5VV43 1072 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ARCQ7LC44 396 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ACOT1Q86TX2 421 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 RHOT2Q8IXI1 618 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 RNF10Q8N5U6 811 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 PFDN4Q9NQP4 134 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ASNSD1Q9NWL6 643 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 LMCD1Q9NZU5 365 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 GTF3C4Q9UKN8 822 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 M0QYV0 167 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 TRIM66O15016 1216 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 ERVK-21P61565 698 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 SMAD3P84022 425 aaKnown RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 IFI16Q16666 785 aaKnown RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 PTPROQ16827 1216 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 PPP1R26Q5T8A7 1209 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 LIN9Q5TKA1 542 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 VSTM1Q6UX27 236 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 PPP1R13BQ96KQ4 1090 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 HSFY1Q96LI6 401 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 C11orf84Q9BUA3 381 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 PRO3102Q9H379 93 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 ADAMTS1Q9UHI8 967 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 SCINQ9Y6U3 715 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 KRT86O43790 486 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 LILRB3O75022 631 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 H2AFZP0C0S5 128 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 CTSAP10619 480 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 MTF1Q14872 753 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 H2AFVQ71UI9 128 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 FAM35AQ86V20 835 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 OR10T2Q8NGX3 314 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 SECISBP2LQ93073 1101 aaKnown RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 SLC4A5Q9BY07 1137 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 B3GNT5Q9BYG0 378 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 RRAGDQ9NQL2 400 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 IRAK4Q9NWZ3 460 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 UVRAGQ9P2Y5 699 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 CACNG4Q9UBN1 327 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 ATG2AQ2TAZ0 1938 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 F8W810 466 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 KIF2AO00139 706 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 ZNF500O60304 480 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 FGF18O76093 207 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 URODP06132 367 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 POU2F2P09086 479 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 NPR3P17342 541 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 GPD2P43304 727 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 PTP4A2Q12974 167 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 GPR17Q13304 367 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 LLGL1Q15334 1064 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 SHHQ15465 462 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 CTXN3Q4LDR2 81 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms