RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CCDC142Q17RM4 750 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 WDR44Q5JSH3 913 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 TDRD10Q5VZ19 366 aaKnown RBP14.98□□□□□ -0.01
TPM1-202ENST00000288398 IL31Q6EBC2 164 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 CNNM4Q6P4Q7 775 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 SYAP1Q96A49 352 aaPredicted RBP14.98□□□□□ -0.01
TPM1-202ENST00000288398 PCED1BQ96HM7 432 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 SLITRK1Q96PX8 696 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 ELOVL4Q9GZR5 314 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 C2orf42Q9NWW7 574 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 NXF1Q9UBU9 619 aaKnown RBP14.98□□□□□ -0.01
TPM1-202ENST00000288398 CFAP45Q9UL16 551 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 ARHGAP26Q9UNA1 814 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 ZNF638Q14966 1978 aaKnown RBP14.98□□□□□ -0.01
TPM1-202ENST00000288398 OTOL1A6NHN0 477 aaPredicted RBP14.97□□□□□ -0.01
TPM1-202ENST00000288398 A8MXQ7 604 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 AXIN1O15169 862 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 TACC1O75410 805 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 AKAP3O75969 853 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 ZSCAN22P10073 491 aaPredicted RBP14.97□□□□□ -0.01
TPM1-202ENST00000288398 TRIM21P19474 475 aaKnown RBP14.97□□□□□ -0.01
TPM1-202ENST00000288398 ATICP31939 592 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 AFMP43652 599 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 ELF2Q15723 593 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 SHC4Q6S5L8 630 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 EPM2AIP1Q7L775 607 aaPredicted RBP14.97□□□□□ -0.01
TPM1-202ENST00000288398 RPLP0P6Q8NHW5 317 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
TPM1-202ENST00000288398 CHFRQ96EP1 664 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 LOXL4Q96JB6 756 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 SLC22A12Q96S37 553 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 MRPL45Q9BRJ2 306 aaKnown RBP14.97□□□□□ -0.01
TPM1-202ENST00000288398 BLZF1Q9H2G9 400 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 SLC39A2Q9NP94 309 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 CRTAC1Q9NQ79 661 aa14.97□□□□□ -0.01
TPM1-202ENST00000288398 PVALEFA0A1B0GWK0 134 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 F8VP50 259 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 SLC9A3R1O14745 358 aaPredicted RBP14.96□□□□□ -0.01
TPM1-202ENST00000288398 APBB3O95704 486 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 PTPN1P18031 435 aaKnown RBP14.96□□□□□ -0.01
TPM1-202ENST00000288398 TGM1P22735 817 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 AP3M2P53677 418 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 KNOP1Q1ED39 458 aaKnown RBP14.96□□□□□ -0.01
TPM1-202ENST00000288398 EML3Q32P44 896 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 SCARA3Q6AZY7 606 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 ATL3Q6DD88 541 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 PKN3Q6P5Z2 889 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 DDX42Q86XP3 938 aaKnown RBP eCLIP14.96□□□□□ -0.01
TPM1-202ENST00000288398 SCFD1Q8WVM8 642 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 C8orf48Q96LL4 319 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 HHIPQ96QV1 700 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 MED10Q9BTT4 135 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 ARRDC1-AS1Q9H2J1 176 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 EXOC1Q9NV70 894 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 GCNT4Q9P109 453 aa14.96□□□□□ -0.01
TPM1-202ENST00000288398 KIF26AQ9ULI4 1882 aaPredicted RBP14.95□□□□□ -0.02
TPM1-202ENST00000288398 LEFTY2O00292 366 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 SLC30A4O14863 429 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 TGFB1I1O43294 461 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 RHOBTB1O94844 696 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 RTN3O95197 1032 aaPredicted RBP14.95□□□□□ -0.02
TPM1-202ENST00000288398 F13A1P00488 732 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 CST3P01034 146 aaPredicted RBP14.95□□□□□ -0.02
TPM1-202ENST00000288398 P4HA1P13674 534 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 TCF3P15923 654 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 HOXD13P35453 343 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 NOP14P78316 857 aaKnown RBP14.95□□□□□ -0.02
TPM1-202ENST00000288398 DMC1Q14565 340 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 ZNF699Q32M78 642 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 ZNF667Q5HYK9 610 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 SYT13Q7L8C5 426 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 LIMS2Q7Z4I7 341 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 B3GALNT2Q8NCR0 500 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 PDZD8Q8NEN9 1154 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 TSTD1Q8NFU3 115 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 RIN3Q8TB24 985 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 SNX21Q969T3 373 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 TNIP3Q96KP6 325 aa14.95□□□□□ -0.02
TPM1-202ENST00000288398 ZNF840PA6NDX5 716 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 EPN2O95208 641 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 STAU1O95793 577 aaKnown RBP14.94□□□□□ -0.02
TPM1-202ENST00000288398 MBL2P11226 248 aaPredicted RBP14.94□□□□□ -0.02
TPM1-202ENST00000288398 YWHAQP27348 245 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 GBP1P32455 592 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 DGKEP52429 567 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 MYL6P60660 151 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 USP46P62068 366 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 TAF10Q12962 218 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 BMT2Q1RMZ1 405 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 PPM1JQ5JR12 505 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 KBTBD6Q86V97 674 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 C11orf74Q86VG3 221 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 C12orf56Q8IXR9 622 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 NUP93Q8N1F7 819 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 FBXO32Q969P5 355 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 CCDC47Q96A33 483 aaKnown RBP14.94□□□□□ -0.02
TPM1-202ENST00000288398 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 NACA2Q9H009 215 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 FBRSL1Q9HCM7 1045 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms