RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ZBTB45Q96K62 511 aaPredicted RBP7.96□□□□□ -1.14
TRIM42-201ENST00000286349 SNX27Q96L92 541 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 PI4K2AQ9BTU6 479 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 AP1M1Q9BXS5 423 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 FZD8Q9H461 694 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 CASS4Q9NQ75 786 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 CPSF3Q9UKF6 684 aaKnown RBP7.96□□□□□ -1.14
TRIM42-201ENST00000286349 TMCO1Q9UM00 188 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 NFU1Q9UMS0 254 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 PCDHB4Q9Y5E5 795 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 PODXLO00592 558 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 FAM189A1O60320 539 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 FSBPO95073 299 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 LSM8O95777 96 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ASS1P00966 412 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 TNNC2P02585 160 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 HNRNPCP07910 306 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 CCDC166P0CW27 439 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 SRGAP2CP0DJJ0 459 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 CCL5P13501 91 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ACO1P21399 889 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 MARK3P27448 753 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 GNA15P30679 374 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 SLC8A1P32418 973 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 GGCXP38435 758 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 FNTAP49354 379 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 CARSP49589 748 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 PMS2P54278 862 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 NKX3-2P78367 333 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 BEX3Q00994 111 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 TRPC3Q13507 836 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 PABPC1LQ4VXU2 614 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ATF7IP2Q5U623 682 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 IFNLR1Q8IU57 520 aaPredicted RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 RHPN2Q8IUC4 686 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 CD302Q8IX05 232 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ARMC5Q96C12 935 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ANKRD36BP1Q96IX9 119 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 SPACA7Q96KW9 195 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 SH3GL2Q99962 352 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ZNF518BQ9C0D4 1074 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 FAM124BQ9H5Z6 455 aaPredicted RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 FAM204AQ9H8W3 233 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 HMX1Q9NP08 348 aaPredicted RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 PAK6Q9NQU5 681 aaPredicted RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 HESX1Q9UBX0 185 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 PARP2Q9UGN5 583 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 DDX20Q9UHI6 824 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 TNFSF13BQ9Y275 285 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 TMEM247A6NEH6 219 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 B4GALT4O60513 344 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 PHF2O75151 1096 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ADAMTS4O75173 837 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 DUSP11O75319 330 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 TMCC1O94876 653 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 PGK1P00558 417 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 TMEM191BP0C7N4 346 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 AKR1A1P14550 325 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 HSPA9P38646 679 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 DRG2P55039 364 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 DR1Q01658 176 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 C1QBPQ07021 282 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 MKRN4PQ13434 485 aaPredicted RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 HLTFQ14527 1009 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 CEP85LQ5SZL2 805 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 COL13A1Q5TAT6 717 aaPredicted RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 DCAF12L1Q5VU92 463 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 EFCAB12Q6NXP0 572 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 LRIG3Q6UXM1 1119 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 PHF13Q86YI8 300 aaPredicted RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 KLHDC9Q8NEP7 349 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 TNIP2Q8NFZ5 429 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 NIF3L1Q9GZT8 377 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 DDX47Q9H0S4 455 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ABCG4Q9H172 646 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 UPF3AQ9H1J1 476 aaKnown RBP7.95□□□□□ -1.14
TRIM42-201ENST00000286349 SEMA4AQ9H3S1 761 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 PTPRHQ9HD43 1115 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 IL20Q9NYY1 176 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 ATXN10Q9UBB4 475 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 Q9Y3F1 56 aa7.95□□□□□ -1.14
TRIM42-201ENST00000286349 MYO1FO00160 1098 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 HOXD8P13378 290 aaPredicted RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 GJA9P57773 515 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 CDC42EP1Q00587 391 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 PTP4A2Q12974 167 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 DRP2Q13474 957 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 ZNF568Q3ZCX4 644 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 EGFLAMQ63HQ2 1017 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 TMEM270Q6UE05 265 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 TLK2Q86UE8 772 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 CCDC89Q8N998 374 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 RBBP8NLQ8NC74 664 aaPredicted RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 OR6J1Q8NGC5 347 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 EIF2AQ9BY44 585 aaKnown RBP7.94□□□□□ -1.14
TRIM42-201ENST00000286349 CIDEBQ9UHD4 219 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 PCYOX1Q9UHG3 505 aa7.94□□□□□ -1.14
TRIM42-201ENST00000286349 ANAPC7Q9UJX3 599 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms