RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 LPCAT4Q643R3 524 aa16.33■□□□□ 0.21
USP43-201ENST00000285199 PPP1R2P3Q6NXS1 205 aa16.33■□□□□ 0.21
USP43-201ENST00000285199 NPNTQ6UXI9 565 aa16.33■□□□□ 0.21
USP43-201ENST00000285199 OR6P1Q8NGX9 317 aa16.33■□□□□ 0.21
USP43-201ENST00000285199 KREMEN1Q96MU8 473 aa16.33■□□□□ 0.21
USP43-201ENST00000285199 RIT2Q99578 217 aa16.33■□□□□ 0.21
USP43-201ENST00000285199 NFS1Q9Y697 457 aa16.33■□□□□ 0.21
USP43-201ENST00000285199 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.2
USP43-201ENST00000285199 BST1Q10588 318 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 SLC26A11Q86WA9 606 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 SIX6OS1Q8N1H7 587 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 ZNF277Q9NRM2 450 aaPredicted RBP16.33■□□□□ 0.2
USP43-201ENST00000285199 RNF19AQ9NV58 838 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 SLC24A2Q9UI40 661 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 FAM155BO75949 473 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 FAM200BP0CF97 657 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 NPR1P16066 1061 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 MRPS22P82650 360 aaKnown RBP16.33■□□□□ 0.2
USP43-201ENST00000285199 MCL1Q07820 350 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 CYP24A1Q07973 514 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 NRF1Q16656 503 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 ZNF786Q8N393 782 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 CDHR1Q96JP9 859 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 WDR18Q9BV38 432 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 ADNPQ9H2P0 1102 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 LRRC19Q9H756 370 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 RPS6KL1Q9Y6S9 549 aa16.33■□□□□ 0.2
USP43-201ENST00000285199 GNL1P36915 607 aaPredicted RBP16.32■□□□□ 0.2
USP43-201ENST00000285199 TBL3Q12788 808 aaKnown RBP16.32■□□□□ 0.2
USP43-201ENST00000285199 USP10Q14694 798 aaKnown RBP16.32■□□□□ 0.2
USP43-201ENST00000285199 UTS2BQ765I0 119 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 ZCCHC9Q8N567 271 aaKnown RBP16.32■□□□□ 0.2
USP43-201ENST00000285199 KLHL4Q9C0H6 718 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 SEMA6AQ9H2E6 1030 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 CCDC68Q9H2F9 335 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 HERC5Q9UII4 1024 aaKnown RBP16.32■□□□□ 0.2
USP43-201ENST00000285199 FGFR3P22607 806 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 HMGCS2P54868 508 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 WDR4P57081 412 aaKnown RBP16.32■□□□□ 0.2
USP43-201ENST00000285199 RIPK1Q13546 671 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 EMC2Q15006 297 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 TRMT5Q32P41 509 aaKnown RBP16.32■□□□□ 0.2
USP43-201ENST00000285199 VSTM1Q6UX27 236 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 INPP5DQ92835 1189 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 ZDHHC18Q9NUE0 388 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 USP4Q13107 963 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
USP43-201ENST00000285199 WLSQ5T9L3 541 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 ABRAQ8N0Z2 381 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 KCND2Q9NZV8 630 aa16.32■□□□□ 0.2
USP43-201ENST00000285199 HSPA8P11142 646 aaKnown RBP16.31■□□□□ 0.2
USP43-201ENST00000285199 NRLP54845 237 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
USP43-201ENST00000285199 CISHQ9NSE2 258 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 UBP1Q9NZI7 540 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 PAK5Q9P286 719 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 BTNL10A8MVZ5 291 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 A8MXQ7 604 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 C6orf222P0C671 652 aaPredicted RBP16.31■□□□□ 0.2
USP43-201ENST00000285199 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
USP43-201ENST00000285199 PEX6Q13608 980 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 Q4G0T1 1027 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 SLC44A4Q53GD3 710 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 MFN1Q8IWA4 741 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 DDIASQ8IXT1 998 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
USP43-201ENST00000285199 PTPRHQ9HD43 1115 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 SOX13Q9UN79 622 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 CYB561D2O14569 222 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 SH3BP5O60239 455 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 USP12O75317 370 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 GLRA2P23416 452 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 PTGIRP43119 386 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 FSTL1Q12841 308 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 N4BP2L1Q5TBK1 243 aaPredicted RBP16.31■□□□□ 0.2
USP43-201ENST00000285199 CYP2R1Q6VVX0 501 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 COPS7BQ9H9Q2 264 aaPredicted RBP16.31■□□□□ 0.2
USP43-201ENST00000285199 CYP4F12Q9HCS2 524 aa16.31■□□□□ 0.2
USP43-201ENST00000285199 ATXN2Q99700 1313 aaKnown RBP16.31■□□□□ 0.2
USP43-201ENST00000285199 FSCN2O14926 492 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 GSC2O15499 205 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 HNRNPRO43390 633 aaKnown RBP16.3■□□□□ 0.2
USP43-201ENST00000285199 YWHAHQ04917 246 aaPredicted RBP16.3■□□□□ 0.2
USP43-201ENST00000285199 TNFAIP1Q13829 316 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 PPP2R3CQ969Q6 453 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 TMEM165Q9HC07 324 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 SLC12A4Q9UP95 1085 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 MYH6P13533 1939 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 PRR5-ARHGAP8B1AHC4 643 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 EXTL3O43909 919 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 LYPLA1O75608 230 aaPredicted RBP16.3■□□□□ 0.2
USP43-201ENST00000285199 PRKCBP05771 671 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 TPBGLP0DKB5 382 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 CA8P35219 290 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 ARHGAP8P85298 464 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 HAUS8Q9BT25 410 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 DRC3Q9H069 523 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 RSAD1Q9HA92 442 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms