RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PTPN20Q4JDL3 420 aa23.04■■□□□ 1.28
PDLIM3-203ENST00000284771 PDE12Q6L8Q7 609 aaKnown RBP23.04■■□□□ 1.28
PDLIM3-203ENST00000284771 PACSIN1Q9BY11 444 aa23.04■■□□□ 1.28
PDLIM3-203ENST00000284771 XPO1O14980 1071 aaKnown RBP23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 FTLP02792 175 aaPredicted RBP23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 HAPLN1P10915 354 aaPredicted RBP23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 GRIK1P39086 918 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 MAGEA11P43364 429 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 PLA2G4AP47712 749 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 RGS7P49802 495 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 CLCN4P51793 760 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 PTP4A2Q12974 167 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 PDCLQ13371 301 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 DDR2Q16832 855 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 SDHAF4Q5VUM1 108 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 VSTM1Q6UX27 236 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 SLC4A5Q9BY07 1137 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 PYCARDQ9ULZ3 195 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 TFR2Q9UP52 801 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 A0A0U1RQJ8 604 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 PIK3R2O00459 728 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 RTN2O75298 545 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 SETSIPP0DME0 302 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 MMP8P22894 467 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 RPL34P49207 117 aaKnown RBP23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 GRIN2CQ14957 1233 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 GPRIN1Q7Z2K8 1008 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 RBM23Q86U06 439 aaKnown RBP23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 STKLD1Q8NE28 680 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 ATRIPQ8WXE1 791 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 CYP4F11Q9HBI6 524 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 DMAP1Q9NPF5 467 aaPredicted RBP23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 CEP83Q9Y592 693 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 ADGRG1Q9Y653 693 aa23.03■■□□□ 1.28
PDLIM3-203ENST00000284771 CLASP2O75122 1294 aaKnown RBP23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 NSFP46459 744 aaKnown RBP23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 MGAT5BQ3V5L5 792 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 MON1BQ7L1V2 547 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 PHF13Q86YI8 300 aaPredicted RBP23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 SCN4BQ8IWT1 228 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 TCEAL8Q8IYN2 117 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 GPR152Q8TDT2 470 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 STK32AQ8WU08 396 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 MRPL38Q96DV4 380 aaKnown RBP23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 PPP1R13BQ96KQ4 1090 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 SEPT5Q99719 369 aaPredicted RBP23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 PRDM12Q9H4Q4 367 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 ST7Q9NRC1 585 aa23.02■■□□□ 1.28
PDLIM3-203ENST00000284771 PRRC2BQ5JSZ5 2229 aaKnown RBP23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 RCCD1A6NED2 376 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 TNFRSF10BO14763 440 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 ATF6P18850 670 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 LLGL2Q6P1M3 1020 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 MMS22LQ6ZRQ5 1243 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 TMEM110Q86TL2 294 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 MCOLN2Q8IZK6 566 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 C8orf48Q96LL4 319 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 UBXN6Q9BZV1 441 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 HSFX1Q9UBD0 423 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 PCDHA13Q9Y5I0 950 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 MTCL1Q9Y4B5 1905 aaKnown RBP23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 ATP8B3O60423 1300 aa23.01■■□□□ 1.27
PDLIM3-203ENST00000284771 E5RJQ4 531 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 NRDCO43847 1150 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 ERBB2P04626 1255 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 GALCP54803 685 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 RAB41Q5JT25 222 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 ERICH1Q86X53 443 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 KCTD13Q8WZ19 329 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 HSFY1Q96LI6 401 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 C11orf70Q9BRQ4 267 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 FBXW11Q9UKB1 542 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 TMEM265A0A087WTH1 108 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 GLUD1P00367 558 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 GTF2F1P35269 517 aaKnown RBP eCLIP23■■□□□ 1.27
PDLIM3-203ENST00000284771 MAGEA1P43355 309 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 GABRB2P47870 512 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 SLC8A3P57103 927 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 RBM10P98175 930 aaKnown RBP23■■□□□ 1.27
PDLIM3-203ENST00000284771 SPA17Q15506 151 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 CYP4A22Q5TCH4 519 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 PHLDB2Q86SQ0 1253 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 SCAMP5Q8TAC9 235 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 SLC22A17Q8WUG5 538 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 THAP2Q9H0W7 228 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 ADAM22Q9P0K1 906 aa23■■□□□ 1.27
PDLIM3-203ENST00000284771 CHORDC1Q9UHD1 332 aaPredicted RBP23■■□□□ 1.27
PDLIM3-203ENST00000284771 GREB1Q4ZG55 1949 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 PATJQ8NI35 1801 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 ABL1P00519 1130 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 EPCAMP16422 314 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 ABCB4P21439 1286 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 TUFMP49411 452 aaKnown RBP22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 HS1BP3Q53T59 392 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 SCUBE3Q8IX30 993 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 KREMEN2Q8NCW0 462 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 PNPLA8Q9NP80 782 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 MAFFQ9ULX9 164 aa22.99■■□□□ 1.27
PDLIM3-203ENST00000284771 HCFC2Q9Y5Z7 792 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms