RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TMED2Q15363 201 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 SGSM1Q2NKQ1 1148 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 RNASEH2BQ5TBB1 312 aaKnown RBP13.56□□□□□ -0.24
C9orf3-201ENST00000277198 DAB2IPQ5VWQ8 1189 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 DCUN1D2Q6PH85 259 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 SLC39A5Q6ZMH5 540 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 OR5B17Q8NGF7 314 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 FNIP1Q8TF40 1166 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 SMC6Q96SB8 1091 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 NIF3L1Q9GZT8 377 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 UPF3AQ9H1J1 476 aaKnown RBP13.56□□□□□ -0.24
C9orf3-201ENST00000277198 TXLNGQ9NUQ3 528 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 NR2E3Q9Y5X4 410 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 DYNC1LI2O43237 492 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-201ENST00000277198 TOM1L1O75674 476 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 UNC5CO95185 931 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 PECAM1P16284 738 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-201ENST00000277198 TSHRP16473 764 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 ATF7P17544 494 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-201ENST00000277198 CCND1P24385 295 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 CDKN2BP42772 138 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 GJA9P57773 515 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 YWHAEP62258 255 aaKnown RBP13.55□□□□□ -0.24
C9orf3-201ENST00000277198 GPS1Q13098 491 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 SETDB1Q15047 1291 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 TARBP2Q15633 366 aaKnown RBP13.55□□□□□ -0.24
C9orf3-201ENST00000277198 PDK4Q16654 411 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 CGB2Q6NT52 195 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 SLC35B2Q8TB61 432 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 PPP1R13LQ8WUF5 828 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 ZBTB45Q96K62 511 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-201ENST00000277198 RAB3IPQ96QF0 476 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-201ENST00000277198 VTA1Q9NP79 307 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 USH1CQ9Y6N9 552 aa13.55□□□□□ -0.24
C9orf3-201ENST00000277198 GAS2O43903 313 aaKnown RBP13.54□□□□□ -0.24
C9orf3-201ENST00000277198 KRT7P08729 469 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 KRT10P13645 584 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 ALDH3A1P30838 453 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 POLR2BP30876 1174 aaKnown RBP13.54□□□□□ -0.24
C9orf3-201ENST00000277198 PHBP35232 272 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 SP4Q02446 784 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 ZNF252P-AS1Q0IIN9 211 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 DUOXA2Q1HG44 320 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 GNASQ5JWF2 1037 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 ZFYVE27Q5T4F4 411 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 EXOC8Q8IYI6 725 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 MCEEQ96PE7 176 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 MRPL4Q9BYD3 311 aaKnown RBP13.54□□□□□ -0.24
C9orf3-201ENST00000277198 TRABDQ9H4I3 376 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 MLXIPLQ9NP71 852 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 PSMC3IPQ9P2W1 217 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-201ENST00000277198 DCTN3O75935 186 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 WFS1O76024 890 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 ASGR1P07306 291 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 FOXN2P32314 431 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 GJC1P36383 396 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 KCNJ2P63252 427 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 SNX17Q15036 470 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 PARP6Q2NL67 630 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 EFHC2Q5JST6 749 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 ZBTB41Q5SVQ8 909 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 KAZNQ674X7 775 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 CXCL17Q6UXB2 119 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 SEPT14Q6ZU15 432 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 ERICH1Q86X53 443 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 PRCCQ92733 491 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-201ENST00000277198 FAM118BQ9BPY3 351 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 LHX5Q9H2C1 402 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 PRO3102Q9H379 93 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 CXorf56Q9H5V9 222 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-201ENST00000277198 TELO2Q9Y4R8 837 aa13.54□□□□□ -0.24
C9orf3-201ENST00000277198 F8VP50 259 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 PI4K2BG5E9Z4 385 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 FAM189A1O60320 539 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 MAFO75444 373 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-201ENST00000277198 ZWINTO95229 277 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 KRT15P19012 456 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 CST5P28325 142 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-201ENST00000277198 ELF1P32519 619 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 MSH2P43246 934 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 GEMIN4P57678 1058 aaKnown RBP13.53□□□□□ -0.24
C9orf3-201ENST00000277198 SP2Q02086 613 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 TLE2Q04725 743 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 ZKSCAN8Q15776 578 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-201ENST00000277198 TAZQ16635 292 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 HIF1AQ16665 826 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 WDR72Q3MJ13 1102 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 DUSP28Q4G0W2 176 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 ATP13A4Q4VNC1 1196 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 FAM160B1Q5W0V3 765 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 ECHDC2Q86YB7 292 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 PPIL6Q8IXY8 311 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 THNSL1Q8IYQ7 743 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms