RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ADCY8P40145 1251 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 ZNF844Q08AG5 666 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 SLMAPQ14BN4 828 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 TRIP13Q15645 432 aaPredicted RBP10.07□□□□□ -0.8
TRIM55-201ENST00000276573 KCNT1Q5JUK3 1230 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 RHBDF2Q6PJF5 856 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 MRPL10Q7Z7H8 261 aaKnown RBP10.07□□□□□ -0.8
TRIM55-201ENST00000276573 OSTM1Q86WC4 334 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 HACE1Q8IYU2 909 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 TOP6BLQ8N6T0 577 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 GSTCDQ8NEC7 633 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 PIWIL1Q96J94 861 aaKnown RBP10.07□□□□□ -0.8
TRIM55-201ENST00000276573 EPB41L4BQ9H329 900 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 PABPC3Q9H361 631 aaKnown RBP10.07□□□□□ -0.8
TRIM55-201ENST00000276573 AGO3Q9H9G7 860 aaKnown RBP10.07□□□□□ -0.8
TRIM55-201ENST00000276573 MIOSQ9NXC5 875 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 DNPEPQ9ULA0 475 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 USP18Q9UMW8 372 aa10.07□□□□□ -0.8
TRIM55-201ENST00000276573 CYB561D2O14569 222 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 PAPSS1O43252 624 aaPredicted RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 GRAP2O75791 330 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 RARGP13631 454 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 CCDC130P13994 396 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ATF2P15336 505 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 THPOP40225 353 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 RPL34P49207 117 aaKnown RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 LMAN1P49257 510 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 EIF3BP55884 814 aaKnown RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 CAV1Q03135 178 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 BST2Q10589 180 aaKnown RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 BYSLQ13895 437 aaKnown RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 TAF5Q15542 800 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 PTGISQ16647 500 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 SMTNL2Q2TAL5 461 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 CCDC14Q49A88 953 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 KCTD16Q68DU8 428 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 OLFML1Q6UWY5 402 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ZNF365Q70YC5 407 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ZDHHC17Q8IUH5 632 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 REM2Q8IYK8 340 aaPredicted RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ADGRF2Q8IZF7 708 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 CCDC89Q8N998 374 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 PCSK9Q8NBP7 692 aaKnown RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 KCTD6Q8NC69 237 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ATP6V1G3Q96LB4 118 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 GAD1Q99259 594 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 OSBPL7Q9BZF2 842 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 TSPYL2Q9H2G4 693 aaPredicted RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 SEMA4AQ9H3S1 761 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 SLC38A7Q9NVC3 462 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ANAPC5Q9UJX4 755 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ZNF148Q9UQR1 794 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 GIT1Q9Y2X7 761 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 GOLGA6L10A6NI86 522 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 HMGB1P1B2RPK0 211 aaPredicted RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 DPYSL4O14531 572 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ENDOD1O94919 500 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 MYCNP04198 464 aaPredicted RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 THP07101 528 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 NUDT17P0C025 328 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 MYZAPP0CAP1 466 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 IGFBP6P24592 240 aaPredicted RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 KLRC2P26717 231 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ADORA2BP29275 332 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 ITGA8P53708 1063 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 BCAT1P54687 386 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 VCPP55072 806 aaKnown RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 C15orf59Q2T9L4 293 aaPredicted RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 DEFB115Q30KQ5 88 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 RAB6CQ53S08 254 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 EMC10Q5UCC4 262 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 AGMOQ6ZNB7 445 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 BBS12Q6ZW61 710 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 GSTA5Q7RTV2 222 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 BBOF1Q8ND07 529 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 NKD2Q969F2 451 aaPredicted RBP10.06□□□□□ -0.8
TRIM55-201ENST00000276573 TNIP3Q96KP6 325 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 PEBP4Q96S96 227 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 RAB6CQ9H0N0 254 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 TSPYL1Q9H0U9 437 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 CYLDQ9NQC7 956 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 SRRDQ9UH36 339 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 PADI3Q9ULW8 664 aa10.06□□□□□ -0.8
TRIM55-201ENST00000276573 GABRDO14764 452 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 CST8O60676 142 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 ZNF623O75123 536 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 CD48P09326 243 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 PTPN1P18031 435 aaKnown RBP10.05□□□□□ -0.8
TRIM55-201ENST00000276573 HOXD10P28358 340 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 MLH1P40692 756 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 ARSEP51690 589 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 AFF1P51825 1210 aaKnown RBP10.05□□□□□ -0.8
TRIM55-201ENST00000276573 SKOR1P84550 965 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 SLC29A2Q14542 456 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 DSC3Q14574 896 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 OASLQ15646 514 aaKnown RBP10.05□□□□□ -0.8
TRIM55-201ENST00000276573 BOLA3Q53S33 107 aa10.05□□□□□ -0.8
TRIM55-201ENST00000276573 AGBL2Q5U5Z8 902 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms