RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 KIF9Q9HAQ2 790 aa9.04□□□□□ -0.96
RPS3A-201ENST00000274065 TMPRSS4Q9NRS4 437 aa9.04□□□□□ -0.96
RPS3A-201ENST00000274065 SLC6A14Q9UN76 642 aa9.04□□□□□ -0.96
RPS3A-201ENST00000274065 WNT6Q9Y6F9 365 aa9.04□□□□□ -0.96
RPS3A-201ENST00000274065 PLXNB3Q9ULL4 1909 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 PPEF2O14830 753 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 F11P03951 625 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 MCF2P10911 925 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 HMGA1P17096 107 aaKnown RBP9.03□□□□□ -0.96
RPS3A-201ENST00000274065 LRPAP1P30533 357 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 OPRD1P41143 372 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 PI4KAP42356 2102 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 HNRNPDQ14103 355 aaKnown RBP9.03□□□□□ -0.96
RPS3A-201ENST00000274065 ZNF77Q15935 545 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 TAF12Q16514 161 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 DUOXA1Q1HG43 343 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 SLC39A12Q504Y0 691 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 LARP1BQ659C4 914 aaKnown RBP9.03□□□□□ -0.96
RPS3A-201ENST00000274065 MPZL3Q6UWV2 235 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 DSTYKQ6XUX3 929 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 SLCO6A1Q86UG4 719 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 TNFRSF25Q93038 417 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 EXOC4Q96A65 974 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 SPACA7Q96KW9 195 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 TCHPQ9BT92 498 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 MRPL4Q9BYD3 311 aaKnown RBP9.03□□□□□ -0.96
RPS3A-201ENST00000274065 TMEM60Q9H2L4 133 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 TUFT1Q9NNX1 390 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
RPS3A-201ENST00000274065 DUS2Q9NX74 493 aaKnown RBP9.03□□□□□ -0.96
RPS3A-201ENST00000274065 HSFX1Q9UBD0 423 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 HECTD1Q9ULT8 2610 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 PHLPP2Q6ZVD8 1323 aa9.03□□□□□ -0.96
RPS3A-201ENST00000274065 CCDC169A6NNP5 214 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 SGK1O00141 431 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 NEMFO60524 1076 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 TADA3O75528 432 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 GJB3O75712 270 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ALDH1A2O94788 518 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 SERPINF2P08697 491 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 CXCL8P10145 99 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 TYMPP19971 482 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 DDX6P26196 483 aaKnown RBP eCLIP9.02□□□□□ -0.973e-7■□□□□ 9.5
RPS3A-201ENST00000274065 HOXD12P35452 270 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 NPTX2P47972 431 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 IFNAR2P48551 515 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 TUFMP49411 452 aaKnown RBP9.02□□□□□ -0.97
RPS3A-201ENST00000274065 PEX3P56589 373 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 CYP4F3Q08477 520 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 MESP2Q0VG99 397 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 DMP1Q13316 513 aaPredicted RBP9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ZNF268Q14587 947 aaPredicted RBP9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ZBTB6Q15916 424 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 GAB4Q2WGN9 574 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ARMCX5Q6P1M9 558 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 MON1AQ86VX9 555 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 SKAP1Q86WV1 359 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 EFCAB13Q8IY85 973 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ALLCQ8N6M5 410 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 TXNDC5Q8NBS9 432 aaKnown RBP9.02□□□□□ -0.97
RPS3A-201ENST00000274065 WHAMMQ8TF30 809 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 KIFAP3Q92845 792 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 PCMTD1Q96MG8 357 aaPredicted RBP9.02□□□□□ -0.97
RPS3A-201ENST00000274065 SLC22A12Q96S37 553 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 UBL7Q96S82 380 aaPredicted RBP9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ZCWPW1Q9H0M4 648 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 LINC00597Q9H2U6 94 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 POLMQ9NP87 494 aaPredicted RBP9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ZDHHC4Q9NPG8 344 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ARHGAP28Q9P2N2 729 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 DKK4Q9UBT3 224 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ZMYM5Q9UJ78 669 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 PCDHB9Q9Y5E1 797 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 KIAA1549LQ6ZVL6 1849 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 TNRC6BQ9UPQ9 1833 aaKnown RBP9.02□□□□□ -0.97
RPS3A-201ENST00000274065 MYO16Q9Y6X6 1858 aa9.02□□□□□ -0.97
RPS3A-201ENST00000274065 ADAMTS9Q9P2N4 1935 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 PCDH15Q96QU1 1955 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 A0A087WV48 116 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 KLF8O95600 359 aaPredicted RBP9.01□□□□□ -0.97
RPS3A-201ENST00000274065 HAPLN1P10915 354 aaPredicted RBP9.01□□□□□ -0.97
RPS3A-201ENST00000274065 DPP6P42658 865 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 PTGIRP43119 386 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 GPR15P49685 360 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 FAM160A1Q05DH4 1040 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 USP4Q13107 963 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 ECM1Q16610 540 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 SPDYCQ5MJ68 293 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 EMC10Q5UCC4 262 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 SDHAF4Q5VUM1 108 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 FOXD4L5Q5VV16 416 aaPredicted RBP9.01□□□□□ -0.97
RPS3A-201ENST00000274065 CPLX2Q6PUV4 134 aaKnown RBP9.01□□□□□ -0.97
RPS3A-201ENST00000274065 TOGARAM2Q6ZUX3 1019 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 LRRTM3Q86VH5 581 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 NAXDQ8IW45 347 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 DAW1Q8N136 415 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 IL17RCQ8NAC3 791 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 CCDC26Q8TAB7 109 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 CEP76Q8TAP6 659 aa9.01□□□□□ -0.97
RPS3A-201ENST00000274065 HMGB4Q8WW32 186 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms