RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 WNT6Q9Y6F9 365 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 MORC2Q9Y6X9 1032 aaPredicted RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 HELZP42694 1942 aaKnown RBP9.6□□□□□ -0.87
TPM3-201ENST00000271850 DCLK1O15075 740 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 AXIN1O15169 862 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 S1PR4O95977 384 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 CSH1P0DML2 217 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 CSH2P0DML3 217 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 HNRNPLP14866 589 aaKnown RBP eCLIP9.6□□□□□ -0.87
TPM3-201ENST00000271850 GAP43P17677 238 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 DDX6P26196 483 aaKnown RBP eCLIP9.6□□□□□ -0.87
TPM3-201ENST00000271850 ABCD1P33897 745 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 AVPR1AP37288 418 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 PNPLA4P41247 253 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 FAM160A1Q05DH4 1040 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 POSTNQ15063 836 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 KMT5BQ4FZB7 885 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 TCEAL6Q6IPX3 200 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 SV2BQ7L1I2 683 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 EPM2AIP1Q7L775 607 aaPredicted RBP9.6□□□□□ -0.87
TPM3-201ENST00000271850 ADGRF2Q8IZF7 708 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 TOP6BLQ8N6T0 577 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 ARL14EPQ8N8R7 260 aaPredicted RBP9.6□□□□□ -0.87
TPM3-201ENST00000271850 OSCP1Q8WVF1 389 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 TCEAL3Q969E4 200 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 MYLPFQ96A32 169 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 GCNAQ96QF7 691 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 KIF9Q9HAQ2 790 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 INTS13Q9NVM9 706 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 ITGA11Q9UKX5 1188 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 RAB23Q9ULC3 237 aa9.6□□□□□ -0.87
TPM3-201ENST00000271850 ZZEF1O43149 2961 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 CCDC163A0A0D9SF12 145 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 TGFB1I1O43294 461 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 RPP40O75818 363 aaKnown RBP9.59□□□□□ -0.87
TPM3-201ENST00000271850 CST3P01034 146 aaPredicted RBP9.59□□□□□ -0.87
TPM3-201ENST00000271850 KRT19P08727 400 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 IDEP14735 1019 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 TCF3P15923 654 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 SDHBP21912 280 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 CASP1P29466 404 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 OPRD1P41143 372 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 NASPP49321 788 aaPredicted RBP9.59□□□□□ -0.87
TPM3-201ENST00000271850 TSPY1Q01534 308 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 EHHADHQ08426 723 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 SLC39A14Q15043 492 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 NFE2Q16621 373 aaPredicted RBP9.59□□□□□ -0.87
TPM3-201ENST00000271850 PLK5Q496M5 336 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 TMEM86AQ8N2M4 240 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 GPD1LQ8N335 351 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 PDILTQ8N807 584 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 RPLP0P6Q8NHW5 317 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 PLEKHO2Q8TD55 490 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 MRPS31Q92665 395 aaKnown RBP9.59□□□□□ -0.87
TPM3-201ENST00000271850 P2RY13Q9BPV8 354 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 SYT15Q9BQS2 421 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 MRPL45Q9BRJ2 306 aaKnown RBP9.59□□□□□ -0.87
TPM3-201ENST00000271850 DUSP15Q9H1R2 295 aaPredicted RBP9.59□□□□□ -0.87
TPM3-201ENST00000271850 DPEP3Q9H4B8 488 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 TRPC7Q9HCX4 862 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 PANK4Q9NVE7 773 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 THG1LQ9NWX6 298 aaKnown RBP9.59□□□□□ -0.87
TPM3-201ENST00000271850 CCDC39Q9UFE4 941 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 ABCA7Q8IZY2 2146 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 CHD6Q8TD26 2715 aa9.59□□□□□ -0.87
TPM3-201ENST00000271850 LAMA5O15230 3695 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 SOBPA7XYQ1 873 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 K7EQS6 105 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 SCAMP3O14828 347 aaKnown RBP9.58□□□□□ -0.88
TPM3-201ENST00000271850 HUS1O60921 280 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 OLFM2O95897 454 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 ZNF806P0C7X5 589 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 WARSP23381 471 aaKnown RBP9.58□□□□□ -0.88
TPM3-201ENST00000271850 BDNFP23560 247 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 PMLP29590 882 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 STAT6P42226 847 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 MAGEA11P43364 429 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 LIMK1P53667 647 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 RBP5P82980 135 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 MYL7Q01449 175 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 GRSF1Q12849 480 aaKnown RBP eCLIP9.58□□□□□ -0.88
TPM3-201ENST00000271850 PDGFRLQ15198 375 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 TAF12Q16514 161 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 CEP68Q76N32 757 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 C12orf40Q86WS4 652 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 SCN4BQ8IWT1 228 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 LINC00301Q8NCQ3 95 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 SPATA18Q8TC71 538 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 SH3RF2Q8TEC5 729 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 ELMO3Q96BJ8 720 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 PCED1BQ96HM7 432 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 FUBP3Q96I24 572 aaKnown RBP eCLIP9.58□□□□□ -0.88
TPM3-201ENST00000271850 ZC3H10Q96K80 434 aaKnown RBP9.58□□□□□ -0.88
TPM3-201ENST00000271850 TTLL2Q9BWV7 592 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 TRIM9Q9C026 710 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 RNF38Q9H0F5 515 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 TMEM206Q9H813 350 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 NPDC1Q9NQX5 325 aaPredicted RBP9.58□□□□□ -0.88
TPM3-201ENST00000271850 KBTBD4Q9NVX7 518 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms