RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 SNX5Q9Y5X3 404 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 C2orf81A6NN90 581 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 BST2Q10589 180 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 NYAP1Q6ZVC0 841 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 ARL8AQ96BM9 186 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 PRDM4Q9UKN5 801 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 ARL2BPQ9Y2Y0 163 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 TCP11X1B4DZS4 312 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 RHOBTB1O94844 696 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 ALDH2P05091 517 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 CASP4P49662 377 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 MTA1Q13330 715 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 PPIL2Q13356 520 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 FBXO47Q5MNV8 452 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 CCNJLQ8IV13 435 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 NOA1Q8NC60 698 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 ZNF669Q96BR6 464 aaPredicted RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 PLD1Q13393 1074 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 TTLL9Q3SXZ7 439 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 AARS2Q5JTZ9 985 aaKnown RBP13.79□□□□□ -0.2
SMG9-201ENST00000270066 CYP4F11Q9HBI6 524 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
SMG9-201ENST00000270066 HEATR9A2RTY3 570 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 SYCE1LA8MT33 242 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 ARMC6Q6NXE6 501 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 TLK2Q86UE8 772 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 EIF2AQ9BY44 585 aaKnown RBP13.78□□□□□ -0.2
SMG9-201ENST00000270066 DDX4Q9NQI0 724 aaKnown RBP13.78□□□□□ -0.2
SMG9-201ENST00000270066 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.78□□□□□ -0.2
SMG9-201ENST00000270066 SALL3Q9BXA9 1300 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 OXCT1P55809 520 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 ERVK-9P63128 1117 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 ERVK-24P63145 666 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 CENPPQ6IPU0 288 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 C16orf87Q6PH81 154 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 OR2W6PQ8NHA6 318 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 RUBCNLQ9H714 662 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 SYNDIG1Q9H7V2 258 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 IPPQ9Y573 584 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 LSP1P33241 339 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 NAF1Q96HR8 494 aaKnown RBP13.78□□□□□ -0.2
SMG9-201ENST00000270066 EMILIN2Q9BXX0 1053 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 NEUROG2Q9H2A3 272 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 CISHQ9NSE2 258 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 CHN1P15882 459 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 CHRM3P20309 590 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 PTPN11Q06124 597 aaPredicted RBP13.78□□□□□ -0.2
SMG9-201ENST00000270066 ORC1Q13415 861 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 INPP5AQ14642 412 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 IQSEC1Q6DN90 963 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 SLC27A1Q6PCB7 646 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 LONP2Q86WA8 852 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 NT5DC4Q86YG4 428 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 FAM172AQ8WUF8 416 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 SLC40A1Q9NP59 571 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 MROH1Q8NDA8 1641 aa13.78□□□□□ -0.2
SMG9-201ENST00000270066 CKMP06732 381 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 ALDH18A1P54886 795 aaKnown RBP13.77□□□□□ -0.2
SMG9-201ENST00000270066 MYL6P60660 151 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 TFDP3Q5H9I0 405 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 ANO5Q75V66 913 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 DTX3LQ8TDB6 740 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 CNPY3Q9BT09 278 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 XPNPEP3Q9NQH7 507 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 RIC8BQ9NVN3 520 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 CDYLQ9Y232 598 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 APOA4P06727 396 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 RAP1GAPP47736 663 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.2
SMG9-201ENST00000270066 MAP3K7CLP57077 242 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 HIC1Q14526 733 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 ZMYM2Q9UBW7 1377 aa13.77□□□□□ -0.2
SMG9-201ENST00000270066 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 CXCL8P10145 99 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 PSEN2P49810 448 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 MRNIPQ6NTE8 343 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 MIB1Q86YT6 1006 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 HS6ST3Q8IZP7 471 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 DNAJB3Q8WWF6 145 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 MRPL9Q9BYD2 267 aaKnown RBP13.77□□□□□ -0.21
SMG9-201ENST00000270066 SELENONQ9NZV5 590 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 CLASP2O75122 1294 aaKnown RBP13.77□□□□□ -0.21
SMG9-201ENST00000270066 CTCFP49711 727 aaPredicted RBP13.77□□□□□ -0.21
SMG9-201ENST00000270066 GEMIN4P57678 1058 aaKnown RBP13.77□□□□□ -0.21
SMG9-201ENST00000270066 C4orf33Q8N1A6 199 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 OR9Q1Q8NGQ5 310 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 ZNF507Q8TCN5 953 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 ASB7Q9H672 318 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 SNTG2Q9NY99 539 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 GAKO14976 1311 aa13.77□□□□□ -0.21
SMG9-201ENST00000270066 A0A0A6YYK5 440 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms