RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 POLBP06746 335 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 GJB1P08034 283 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 PDK2Q15119 407 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 PPIL6Q8IXY8 311 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 ZNF669Q96BR6 464 aaPredicted RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 ELMO2Q96JJ3 720 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 GTF2BQ00403 316 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 PPP3CAQ08209 521 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 ADIGQ0VDE8 80 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 COBLL1Q53SF7 1204 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 NYAP1Q6ZVC0 841 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 NT5DC4Q86YG4 428 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 C4orf33Q8N1A6 199 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 SLC2A14Q8TDB8 520 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 PPP1R2P1Q96PQ5 205 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 ABCC6O95255 1503 aa14.27□□□□□ -0.12
NPC1-201ENST00000269228 GMNCA6NCL1 334 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 MYL4P12829 197 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 MLH1P40692 756 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 LBRQ14739 615 aaKnown RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 RABGAP1LQ5R372 815 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 MCOLN2Q8IZK6 566 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 CPSF2Q9P2I0 782 aaKnown RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 SYF2O95926 243 aaKnown RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 AVPR1AP37288 418 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 OTUD4Q01804 1114 aaKnown RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 LAMB3Q13751 1172 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 ANKRD23Q86SG2 305 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 MMGT1Q8N4V1 131 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 MRPL9Q9BYD2 267 aaKnown RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 FAM96AQ9H5X1 160 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 LATS2Q9NRM7 1088 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 SENP1Q9P0U3 644 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 TTLL13PA6NNM8 815 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 KLRC4O43908 158 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 AMHP03971 560 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 ZNF280AP59817 542 aaPredicted RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 MRPS6P82932 125 aaKnown RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 GTF2H3Q13889 308 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 FSCBQ5H9T9 825 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 ANO5Q75V66 913 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 INPP4AQ96PE3 977 aaPredicted RBP14.27□□□□□ -0.13
NPC1-201ENST00000269228 FOXP3Q9BZS1 431 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 TNFSF13BQ9Y275 285 aa14.27□□□□□ -0.13
NPC1-201ENST00000269228 E2F8A0AVK6 867 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 HSPA8P11142 646 aaKnown RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 FNTAP49354 379 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 CTCFP49711 727 aaPredicted RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 ARFIP2P53365 341 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 RBBP7Q16576 425 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SYTL3Q4VX76 610 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 HIBCHQ6NVY1 386 aaPredicted RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 CARNMT1Q8N4J0 409 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 DDI1Q8WTU0 396 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 RIN2Q8WYP3 895 aaPredicted RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 ENDOD1O94919 500 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 ASS1P00966 412 aaKnown RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 ELNP15502 786 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 CCL23P55773 120 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 FOXD4Q12950 439 aaPredicted RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 HSDL1Q3SXM5 330 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SDE2Q6IQ49 451 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 DENND5BQ6ZUT9 1274 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 DDIASQ8IXT1 998 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SH2D3CQ8N5H7 860 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 RNF217Q8TC41 542 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 ANXA9O76027 345 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 MICAL2O94851 1124 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 FARP2O94887 1054 aaPredicted RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 ADRB2P07550 413 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 HIPK4Q8NE63 616 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 PDZD8Q8NEN9 1154 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SPDL1Q96EA4 605 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SENP8Q96LD8 212 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 KLF6Q99612 283 aaPredicted RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 EFHD1Q9BUP0 239 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 ISCUQ9H1K1 167 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 VCX3AQ9NNX9 186 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 PSMC3IPQ9P2W1 217 aaPredicted RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 FAM237AA0A1B0GTK4 181 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SPECC1L-ADORA2AF8WAN1 911 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SMAPO00193 183 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 IKBKEQ14164 716 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 C4orf22Q6V702 233 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SCUBE3Q8IX30 993 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 KAT5Q92993 513 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 SERPINI1Q99574 410 aa14.26□□□□□ -0.13
NPC1-201ENST00000269228 RRP15Q9Y3B9 282 aaKnown RBP14.26□□□□□ -0.13
NPC1-201ENST00000269228 CASZ1Q86V15 1759 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 KIF3CO14782 793 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 HSPA9P38646 679 aaKnown RBP14.25□□□□□ -0.13
NPC1-201ENST00000269228 MAPK7Q13164 816 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 PTK7Q13308 1070 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 SPRYD7Q5W111 196 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 SPOCD1Q6ZMY3 1216 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 PCMTD2Q9NV79 361 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms