RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TAF12Q16514 161 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 GAREM2Q75VX8 874 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 GET4Q7L5D6 327 aaPredicted RBP13.51□□□□□ -0.25
SS18-202ENST00000269138 FAM71AQ8IYT1 594 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 SCAMP5Q8TAC9 235 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 SHKBP1Q8TBC3 707 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 UBA3Q8TBC4 463 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 NECAB3Q96P71 396 aaPredicted RBP13.51□□□□□ -0.25
SS18-202ENST00000269138 MYADMQ96S97 322 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 DUSP16Q9BY84 665 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 IL21Q9HBE4 155 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 AVENQ9NQS1 362 aaPredicted RBP13.51□□□□□ -0.25
SS18-202ENST00000269138 ASAH2Q9NR71 780 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 TSPAN16Q9UKR8 245 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 MRPS23Q9Y3D9 190 aaKnown RBP13.51□□□□□ -0.25
SS18-202ENST00000269138 NOTCH4Q99466 2003 aa13.51□□□□□ -0.25
SS18-202ENST00000269138 HHLA1C9JL84 531 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 F8VZ95 297 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 TNFRSF10BO14763 440 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 AP5Z1O43299 807 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 MICAL2O94851 1124 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 CFHP08603 1231 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 NPR3P17342 541 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 RFX1P22670 979 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 JAM2P57087 298 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 CNGA2Q16280 664 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 TJAP1Q5JTD0 557 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 CYP4A22Q5TCH4 519 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 LCLAT1Q6UWP7 414 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 DENND5BQ6ZUT9 1274 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 PDZD4Q76G19 769 aaPredicted RBP13.5□□□□□ -0.25
SS18-202ENST00000269138 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 TMEM150AQ86TG1 271 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 SLC47A2Q86VL8 602 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 ANKRD52Q8NB46 1076 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 XPO4Q9C0E2 1151 aaKnown RBP13.5□□□□□ -0.25
SS18-202ENST00000269138 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.5□□□□□ -0.25
SS18-202ENST00000269138 PTPRDP23468 1912 aa13.5□□□□□ -0.25
SS18-202ENST00000269138 A0A1W2PQC6 194 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 A0A1W2PRU2 124 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 C2CD4DB7Z1M9 353 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 THAP12O43422 761 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 F11P03951 625 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 GABRR2P28476 465 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 GNA15P30679 374 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 GBP2P32456 591 aaPredicted RBP13.49□□□□□ -0.25
SS18-202ENST00000269138 PBX1P40424 430 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 ZP2Q05996 745 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 PDE4CQ08493 712 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 IFRD2Q12894 506 aaPredicted RBP13.49□□□□□ -0.25
SS18-202ENST00000269138 TEAD2Q15562 447 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 PKDCCQ504Y2 493 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 DENND1BQ6P3S1 775 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 ADHFE1Q8IWW8 467 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 NUP93Q8N1F7 819 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 ST13P5Q8NFI4 369 aaPredicted RBP13.49□□□□□ -0.25
SS18-202ENST00000269138 ZNF606Q8WXB4 792 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 FGF13Q92913 245 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 MCRS1Q96EZ8 462 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 MYRFLQ96LU7 910 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 C5orf42Q9H799 3197 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 TCF20Q9UGU0 1960 aaKnown RBP13.49□□□□□ -0.25
SS18-202ENST00000269138 ZNF197O14709 1029 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 TADA3O75528 432 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 GFPT2O94808 682 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 SLC5A3P53794 718 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 CYP4F8P98187 520 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 STXBP5Q5T5C0 1151 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 NPAS3Q8IXF0 933 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 LEMD2Q8NC56 503 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 TRMT2BQ96GJ1 504 aaKnown RBP13.49□□□□□ -0.25
SS18-202ENST00000269138 CEP295NLQ96MC4 621 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 ZSWIM3Q96MP5 696 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 TTLL2Q9BWV7 592 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 ATXN3LQ9H3M9 355 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 CD320Q9NPF0 282 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 HESX1Q9UBX0 185 aa13.49□□□□□ -0.25
SS18-202ENST00000269138 LOC730098B7Z3J9 87 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 M0QYV0 167 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 GABBR2O75899 941 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 SOX5P35711 763 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 BCAT1P54687 386 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 PTK2Q05397 1052 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 BST2Q10589 180 aaKnown RBP13.48□□□□□ -0.25
SS18-202ENST00000269138 TAF10Q12962 218 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 OTOP3Q7RTS5 596 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 ADAMTS19Q8TE59 1207 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 BAP1Q92560 729 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 SECISBP2LQ93073 1101 aaKnown RBP13.48□□□□□ -0.25
SS18-202ENST00000269138 SPAG5Q96R06 1193 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.48□□□□□ -0.25
SS18-202ENST00000269138 IL37Q9NZH6 218 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 PRKAG3Q9UGI9 489 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 CDH7Q9ULB5 785 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 USTQ9Y2C2 406 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
SS18-202ENST00000269138 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms