RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 CCDC22O60826 627 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 KITP10721 976 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 RBP3P10745 1247 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 PSMC1P62191 440 aaKnown RBP17.68■□□□□ 0.42
RTN1-201ENST00000267484 CAPSQ13938 189 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 KLHL38Q2WGJ6 581 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 SNX30Q5VWJ9 437 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 TMEM154Q6P9G4 183 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 CTAGE3PQ8IX95 158 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 ZNF483Q8TF39 744 aaPredicted RBP17.68■□□□□ 0.42
RTN1-201ENST00000267484 NSL1Q96IY1 281 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 NMUR2Q9GZQ4 415 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 ZNF302Q9NR11 478 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 ARID2Q68CP9 1835 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 NVLO15381 856 aaKnown RBP17.67■□□□□ 0.42
RTN1-201ENST00000267484 GNPTABQ3T906 1256 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 SLFN12LQ6IEE8 588 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 SLC7A3Q8WY07 619 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 CPXM1Q96SM3 734 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 SAR1AQ9NR31 198 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.67■□□□□ 0.42
RTN1-201ENST00000267484 TBX10O75333 385 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 DLDP09622 509 aaKnown RBP17.67■□□□□ 0.42
RTN1-201ENST00000267484 SRGAP2CP0DJJ0 459 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 LMNTD2Q8IXW0 634 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 SPATA18Q8TC71 538 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 ZBTB10Q96DT7 871 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 VPS11Q9H270 941 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 PIDD1Q9HB75 910 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 MAP3K20Q9NYL2 800 aaKnown RBP17.67■□□□□ 0.42
RTN1-201ENST00000267484 DLGAP2Q9P1A6 1054 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 IKBKGQ9Y6K9 419 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 WASF2Q9Y6W5 498 aa17.67■□□□□ 0.42
RTN1-201ENST00000267484 OATP04181 439 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 NAMPTP43490 491 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 DPYSL3Q14195 570 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 PCGF5Q86SE9 256 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 THNSL1Q8IYQ7 743 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 CEP120Q8N960 986 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 FBXO41Q8TF61 875 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 SYNCQ9H7C4 482 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 H0YCG3 227 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 PLSCR1O15162 318 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 TM9SF1O15321 606 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 UGT1A9O60656 530 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 ESRRAP11474 423 aaPredicted RBP17.66■□□□□ 0.42
RTN1-201ENST00000267484 RFC5P40937 340 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 CDK16Q00536 496 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 TRPC3Q13507 836 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 TSNAXIP1Q2TAA8 658 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 BBS12Q6ZW61 710 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 PPM1NQ8N819 430 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 SPDYE1Q8NFV5 336 aaPredicted RBP17.66■□□□□ 0.42
RTN1-201ENST00000267484 SCG3Q8WXD2 468 aaKnown RBP17.66■□□□□ 0.42
RTN1-201ENST00000267484 SKA1Q96BD8 255 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 ZNF333Q96JL9 665 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 NIF3L1Q9GZT8 377 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 DHX33Q9H6R0 707 aaKnown RBP17.66■□□□□ 0.42
RTN1-201ENST00000267484 UGT1A7Q9HAW7 530 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 UGT1A10Q9HAW8 530 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 UGT1A8Q9HAW9 530 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 FCHO1O14526 889 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 CYB561D2O14569 222 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 DKC1O60832 514 aaKnown RBP eCLIP17.66■□□□□ 0.42
RTN1-201ENST00000267484 LDHAP00338 332 aaKnown RBP17.66■□□□□ 0.42
RTN1-201ENST00000267484 INHBAP08476 426 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 KRT19P08727 400 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 AMPD1P23109 780 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 ARL2P36404 184 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 ETV4P43268 484 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 BMPR2Q13873 1038 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 CES4AQ5XG92 561 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 CLPTM1LQ96KA5 538 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 CYTH2Q99418 400 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 SLC13A1Q9BZW2 595 aa17.66■□□□□ 0.42
RTN1-201ENST00000267484 CXorf49A8MYA2 514 aaPredicted RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 HMGCS2P54868 508 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 MXRA7P84157 204 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 THOC5Q13769 683 aaKnown RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 RCN2Q14257 317 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 PRKD1Q15139 912 aaPredicted RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 RASA2Q15283 850 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 CIAPIN1Q6FI81 312 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 C1orf228Q6PIY5 440 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 TEPSINQ96N21 525 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 HMGXB4Q9UGU5 601 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 E7ENQ6 273 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 E7ESA3 106 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 LIN7AO14910 233 aaPredicted RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 TOP3BO95985 862 aaKnown RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 MIPP30301 263 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 PTPN7P35236 360 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 ZNF200P98182 395 aaPredicted RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 ENPEPQ07075 957 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 TMEM132BQ14DG7 1078 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 ZNF699Q32M78 642 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 DARS2Q6PI48 645 aaKnown RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 CCDC33Q8N5R6 958 aa17.65■□□□□ 0.42
RTN1-201ENST00000267484 ASCC2Q9H1I8 757 aaPredicted RBP17.65■□□□□ 0.42
RTN1-201ENST00000267484 SSU72Q9NP77 194 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms