RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 REXO2Q9Y3B8 237 aaKnown RBP17.4■□□□□ 0.38
PHRF1-201ENST00000264555 RNF225M0QZC1 329 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-201ENST00000264555 DNAL1Q4LDG9 190 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 SLFN11Q7Z7L1 901 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 LINC00523Q86TU6 105 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 KIRREL3Q8IZU9 778 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 CALML6Q8TD86 181 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 SUDS3Q9H7L9 328 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-201ENST00000264555 ARHGEF38Q9NXL2 777 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 BST2Q10589 180 aaKnown RBP17.4■□□□□ 0.38
PHRF1-201ENST00000264555 SREBF2Q12772 1141 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 SPDYCQ5MJ68 293 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 TEDDM1Q5T9Z0 273 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 IRF2BP2Q7Z5L9 587 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 NT5DC4Q86YG4 428 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 TAS2R14Q9NYV8 317 aa17.4■□□□□ 0.38
PHRF1-201ENST00000264555 MARCOQ9UEW3 520 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-201ENST00000264555 NCANO14594 1321 aa17.39■□□□□ 0.38
PHRF1-201ENST00000264555 LYPLA2O95372 231 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 CUL3Q13618 768 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 FBXO47Q5MNV8 452 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 LONP2Q86WA8 852 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 TASP1Q9H6P5 420 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 SHOC2Q9UQ13 582 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 COL14A1Q05707 1796 aaKnown RBP17.39■□□□□ 0.37
PHRF1-201ENST00000264555 ZNF669Q96BR6 464 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-201ENST00000264555 GPATCH2LQ9NWQ4 482 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 ADA2Q9NZK5 511 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 PDHXO00330 501 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 ACO1P21399 889 aaKnown RBP17.39■□□□□ 0.37
PHRF1-201ENST00000264555 VGLL4Q14135 290 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 NPY5RQ15761 445 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 TAS2R42Q7RTR8 314 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 DNAJC18Q9H819 358 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 SETD4Q9NVD3 440 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 AP4E1Q9UPM8 1137 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 FBXO21O94952 628 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 CYP1A2P05177 515 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 GLRA2P23416 452 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 NDST1P52848 882 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 SATB1Q01826 763 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 ZNF844Q08AG5 666 aa17.39■□□□□ 0.37
PHRF1-201ENST00000264555 GBA2Q9HCG7 927 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-201ENST00000264555 RPLP2P05387 115 aaKnown RBP17.38■□□□□ 0.37
PHRF1-201ENST00000264555 MYL2P10916 166 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 OR1G1P47890 313 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 NCKAP1LP55160 1127 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 AMPD2Q01433 879 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 ARHGAP18Q8N392 663 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 TRAPPC12Q8WVT3 735 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 OSMRQ99650 979 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 TSPAN16Q9UKR8 245 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 KLHL2O95198 593 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 IPMKQ8NFU5 416 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 ELMO2Q96JJ3 720 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 TBCBQ99426 244 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 PHTF1Q9UMS5 762 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 CCDC78A2IDD5 438 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 B3GAT3O94766 335 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 FCGRTP55899 365 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 RTP1P59025 263 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 IL1RL1Q01638 556 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 HABP4Q5JVS0 413 aaKnown RBP17.38■□□□□ 0.37
PHRF1-201ENST00000264555 ASIC4Q96FT7 647 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 NAT9Q9BTE0 207 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-201ENST00000264555 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 LACTBL1A8MY62 500 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 KBTBD13C9JR72 458 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 ANXA9O76027 345 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 THPOP40225 353 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 EP400NLQ6ZTU2 488 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 DENND5BQ6ZUT9 1274 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 ULK4Q96C45 1275 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 MTBPQ96DY7 904 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 SNTG2Q9NY99 539 aa17.38■□□□□ 0.37
PHRF1-201ENST00000264555 SDR42E2A6NKP2 422 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 SLC27A1Q6PCB7 646 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 ZNF410Q86VK4 478 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 ZDHHC17Q8IUH5 632 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 KATNAL2Q8IYT4 538 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 PIP4K2CQ8TBX8 421 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 SLC26A7Q8TE54 656 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 SHC3Q92529 594 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 FGD4Q96M96 766 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 FZD1Q9UP38 647 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 DNALI1O14645 258 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-201ENST00000264555 ATP9AO75110 1047 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 HMBSP08397 361 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 PYGBP11216 843 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 TGM2P21980 687 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 LHX1P48742 406 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 CHI3L2Q15782 390 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 ARMC2Q8NEN0 867 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 FAM111AQ96PZ2 611 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 PAFAH2Q99487 392 aa17.37■□□□□ 0.37
PHRF1-201ENST00000264555 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
PHRF1-201ENST00000264555 SLC2A3P11169 496 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms