RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PPP3CAQ08209 521 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 MTAPQ13126 283 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 ITPRIPL2Q3MIP1 535 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 TXNDC11Q6PKC3 985 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
USE1-201ENST00000263897 SPATA20Q8TB22 786 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 TNIP3Q96KP6 325 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 TIGD1Q96MW7 591 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 ZNF518BQ9C0D4 1074 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 CHRDQ9H2X0 955 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 TRPC7Q9HCX4 862 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 TMEM30AQ9NV96 361 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 TRPM5Q9NZQ8 1165 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 PCDHA5Q9Y5H7 936 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 PATJQ8NI35 1801 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 KIF26AQ9ULI4 1882 aaPredicted RBP17.1■□□□□ 0.33
USE1-201ENST00000263897 C2orf78A6NCI8 922 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 SMC2O95347 1197 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 TRIM49P0CI25 452 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 TRIM49CP0CI26 452 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 HDCP19113 662 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 PRCPP42785 496 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 PPP3CCP48454 512 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 GCLMP48507 274 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 RUNX3Q13761 415 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 COBLL1Q53SF7 1204 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 ZNF658Q5TYW1 1059 aaPredicted RBP17.1■□□□□ 0.33
USE1-201ENST00000263897 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
USE1-201ENST00000263897 ZC3H14Q6PJT7 736 aaKnown RBP17.1■□□□□ 0.33
USE1-201ENST00000263897 PAQR9Q6ZVX9 377 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 CRYBG2Q8N1P7 616 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 RIN3Q8TB24 985 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 IER2Q9BTL4 223 aa17.1■□□□□ 0.33
USE1-201ENST00000263897 CETN3O15182 167 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 CKMP06732 381 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 PFKLP17858 780 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 PIK3CAP42336 1068 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 ASPAP45381 313 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 SPOPLQ6IQ16 392 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 ACOT1Q86TX2 421 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 UNC93AQ86WB7 457 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 TAS1R2Q8TE23 839 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 EEF2KMTQ96G04 330 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 KCNK16Q96T55 309 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 GTPBP4Q9BZE4 634 aaKnown RBP17.09■□□□□ 0.33
USE1-201ENST00000263897 EBF3Q9H4W6 596 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 HPS4Q9NQG7 708 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
USE1-201ENST00000263897 GVINP1Q7Z2Y8 2422 aa17.09■□□□□ 0.33
USE1-201ENST00000263897 ATP8B3O60423 1300 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 ZNF840PA6NDX5 716 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 OTOL1A6NHN0 477 aaPredicted RBP17.08■□□□□ 0.32
USE1-201ENST00000263897 TCF3P15923 654 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 GTF2H1P32780 548 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 PDE6CP51160 858 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 NDST1P52848 882 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 TAF10Q12962 218 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 LRRC32Q14392 662 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 PON2Q15165 354 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 PDGFRLQ15198 375 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 WDR44Q5JSH3 913 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 DGKKQ5KSL6 1271 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 FAM35AQ86V20 835 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 ELOA2Q8IYF1 753 aaPredicted RBP17.08■□□□□ 0.32
USE1-201ENST00000263897 FUKQ8N0W3 1084 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 NUP93Q8N1F7 819 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 NELL1Q92832 810 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 ERCC4Q92889 916 aaPredicted RBP17.08■□□□□ 0.32
USE1-201ENST00000263897 SMARCE1Q969G3 411 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 MED10Q9BTT4 135 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 IMPG2Q9BZV3 1241 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.32
USE1-201ENST00000263897 PRMT8Q9NR22 394 aaPredicted RBP17.08■□□□□ 0.32
USE1-201ENST00000263897 RTN3O95197 1032 aaPredicted RBP17.07■□□□□ 0.32
USE1-201ENST00000263897 LMNAP02545 664 aaKnown RBP17.07■□□□□ 0.32
USE1-201ENST00000263897 ARSAP15289 507 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 YWHAQP27348 245 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 GAS6Q14393 721 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 MTF1Q14872 753 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 ZNF77Q15935 545 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 KRT39Q6A163 491 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 ANKRD40Q6AI12 368 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 TSSK4Q6SA08 328 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 SPEM1Q8N4L4 309 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 SH3RF2Q8TEC5 729 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 OSCP1Q8WVF1 389 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 SMARCD1Q96GM5 515 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 SLITRK1Q96PX8 696 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 RNF38Q9H0F5 515 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 MMRN2Q9H8L6 949 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 CYP3A43Q9HB55 503 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 APOBEC3GQ9HC16 384 aaKnown RBP17.07■□□□□ 0.32
USE1-201ENST00000263897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.07■□□□□ 0.325e-8■■■■■ 188.3
USE1-201ENST00000263897 RBM12Q9NTZ6 932 aaKnown RBP17.07■□□□□ 0.32
USE1-201ENST00000263897 IL37Q9NZH6 218 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 HMGXB4Q9UGU5 601 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 ARHGAP26Q9UNA1 814 aa17.07■□□□□ 0.32
USE1-201ENST00000263897 WDR87Q6ZQQ6 2873 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms