RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 DBN1Q16643 649 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 ANKRD22Q5VYY1 191 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 DNAJC24Q6P3W2 148 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 PASD1Q8IV76 773 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 ACAP3Q96P50 834 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 FRMD8Q9BZ67 464 aaPredicted RBP12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 STN1Q9H668 368 aaKnown RBP12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 LMCD1Q9NZU5 365 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 ZNF180Q9UJW8 692 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 PLLPQ9Y342 182 aa12.93□□□□□ -0.34
CHMP2B-201ENST00000263780 C2orf71A6NGG8 1288 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 PEX1O43933 1283 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 VCLP18206 1134 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 MMP8P22894 467 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 RPL22P35268 128 aaKnown RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 NPTX2P47972 431 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 TCP10Q12799 353 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 CUL2Q13617 745 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 MMEL1Q495T6 779 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 ARID3BQ8IVW6 561 aaPredicted RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 SP8Q8IXZ3 490 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 NIPA2Q8N8Q9 360 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 LENG1Q96BZ8 264 aaPredicted RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 NTPCRQ9BSD7 190 aaKnown RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 Q9H521 79 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 FAM96AQ9H5X1 160 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 PNPLA8Q9NP80 782 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 KCNH7Q9NS40 1196 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 TBC1D22BQ9NU19 505 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 MKS1Q9NXB0 559 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 CCNL1Q9UK58 526 aaPredicted RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 QSER1Q2KHR3 1735 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 ARHGAP42A6NI28 874 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 H0YCG3 227 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 BIRC5O15392 142 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 CCNT2O60583 730 aaKnown RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 GDF11O95390 407 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 LSM8O95777 96 aaKnown RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 HLA-DRAP01903 254 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 ACO1P21399 889 aaKnown RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 AQP5P55064 265 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 CLDN10P78369 228 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 BST1Q10588 318 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 SHROOM1Q2M3G4 852 aaPredicted RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 TMEM270Q6UE05 265 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 THNSL1Q8IYQ7 743 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 ALDH16A1Q8IZ83 802 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 IRGQQ8WZA9 623 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 MAML3Q96JK9 1138 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 SIRPGQ9P1W8 387 aa12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 COL16A1Q07092 1604 aaPredicted RBP12.92□□□□□ -0.34
CHMP2B-201ENST00000263780 TCRBV9S1A1TA0A576 114 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 G3V3G9 751 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 STRNO43815 780 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 KRT7P08729 469 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 FAM200BP0CF97 657 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 HARSP12081 509 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 PSMC5P62195 406 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 OTUD4Q01804 1114 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 CBLBQ13191 982 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 PSMD6Q15008 389 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 HADHQ16836 314 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ZACNQ401N2 412 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ANKRD20A4Q4UJ75 823 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 XKR9Q5GH70 373 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ANGEL2Q5VTE6 544 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 PLA2G4FQ68DD2 849 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 BBS12Q6ZW61 710 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ACTL9Q8TC94 416 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 CLPTM1LQ96KA5 538 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 GPRC5CQ9NQ84 441 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 GALNT8Q9NY28 637 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 CNTN6Q9UQ52 1028 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ZNFX1Q9P2E3 1918 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 A0A088AWK7 358 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 TRDMT1O14717 391 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 EXTL3O43909 919 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 GH2P01242 217 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 CCDC166P0CW27 439 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 SLURP2P0DP57 97 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ITGB5P18084 799 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 TNNI1P19237 187 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 RPL5P46777 297 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 YWHAGP61981 247 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 RPL7AP62424 266 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 PDK3Q15120 406 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 KBTBD12Q3ZCT8 623 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 KLC3Q6P597 504 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ARCQ7LC44 396 aa12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-201ENST00000263780 ICA1LQ8NDH6 482 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms