RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 TRIM66O15016 1216 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 HCRTO43612 131 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 KLF8O95600 359 aaPredicted RBP9.57□□□□□ -0.88
LCN1-201ENST00000263598 APODP05090 189 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 BDNFP23560 247 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 RDXP35241 583 aaKnown RBP9.57□□□□□ -0.88
LCN1-201ENST00000263598 TXLNAP40222 546 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 EIF2DP41214 584 aaKnown RBP9.57□□□□□ -0.88
LCN1-201ENST00000263598 P2RY2P41231 377 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
LCN1-201ENST00000263598 KCNA1Q09470 495 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 ALCAMQ13740 583 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 RABEP1Q15276 862 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 SF3A1Q15459 793 aaKnown RBP9.57□□□□□ -0.88
LCN1-201ENST00000263598 CCDC142Q17RM4 750 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 TRIM61Q5EBN2 209 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 SPDYCQ5MJ68 293 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 EOGTQ5NDL2 527 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
LCN1-201ENST00000263598 SV2BQ7L1I2 683 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 FILIP1Q7Z7B0 1213 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 OSTM1Q86WC4 334 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 SYT12Q8IV01 421 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 ADGRG2Q8IZP9 1017 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 ALLCQ8N6M5 410 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 DEFB124Q8NES8 71 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 OLIG1Q8TAK6 271 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 CXorf38Q8TB03 319 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 MYLPFQ96A32 169 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 HPDLQ96IR7 371 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 TMX3Q96JJ7 454 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 PNKPQ96T60 521 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 SCNM1Q9BWG6 230 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 MTMR12Q9C0I1 747 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 PDE11AQ9HCR9 933 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 OLFML3Q9NRN5 406 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 TBC1D7Q9P0N9 293 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 SIX4Q9UIU6 781 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 SMC3Q9UQE7 1217 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 SPAG17Q6Q759 2223 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 EML5Q05BV3 1969 aa9.57□□□□□ -0.88
LCN1-201ENST00000263598 DENND4CQ5VZ89 1909 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 OBSL1O75147 1896 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 GOLGA8IPA6NC78 632 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 ZNF840PA6NDX5 716 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 GOLGA8JA6NMD2 632 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.56□□□□□ -0.88
LCN1-201ENST00000263598 KIAA0391O15091 583 aaKnown RBP9.56□□□□□ -0.88
LCN1-201ENST00000263598 ATP2C2O75185 946 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 KAT7O95251 611 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 ADH1CP00326 375 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 ABL1P00519 1130 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 TNNC2P02585 160 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 CYP17A1P05093 508 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 IDEP14735 1019 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 LMO2P25791 158 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 TIE1P35590 1138 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 TNFRSF4P43489 277 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 MAPK8P45983 427 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 ATXN3P54252 364 aaPredicted RBP9.56□□□□□ -0.88
LCN1-201ENST00000263598 NOP14P78316 857 aaKnown RBP9.56□□□□□ -0.88
LCN1-201ENST00000263598 SLC7A9P82251 487 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 ZXDBP98169 803 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 RESTQ13127 1097 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 DHCR24Q15392 516 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 SURF1Q15526 300 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 PREPLQ4J6C6 727 aaPredicted RBP9.56□□□□□ -0.88
LCN1-201ENST00000263598 RRAGBQ5VZM2 374 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 LYSMD4Q5XG99 296 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 TMEM92Q6UXU6 159 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 DDX42Q86XP3 938 aaKnown RBP eCLIP9.56□□□□□ -0.88
LCN1-201ENST00000263598 TMEFF1Q8IYR6 380 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 PGBD3Q8N328 593 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 GPD1LQ8N335 351 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 IL17RCQ8NAC3 791 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 TXNDC5Q8NBS9 432 aaKnown RBP9.56□□□□□ -0.88
LCN1-201ENST00000263598 ZSWIM2Q8NEG5 633 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 RLN3Q8WXF3 142 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 GATA6Q92908 595 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 EPSTI1Q96J88 318 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 TTLL2Q9BWV7 592 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 TMEM121BQ9BXQ6 578 aaPredicted RBP9.56□□□□□ -0.88
LCN1-201ENST00000263598 PCIF1Q9H4Z3 704 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 ARHGEF4Q9NR80 690 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 SMPD4Q9NXE4 827 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
LCN1-201ENST00000263598 CPQQ9Y646 472 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 FRYQ5TBA9 3013 aa9.56□□□□□ -0.88
LCN1-201ENST00000263598 ZNF638Q14966 1978 aaKnown RBP9.55□□□□□ -0.88
LCN1-201ENST00000263598 ASPMQ8IZT6 3477 aa9.55□□□□□ -0.88
LCN1-201ENST00000263598 SDK1Q7Z5N4 2213 aa9.55□□□□□ -0.88
LCN1-201ENST00000263598 A0A0A0MRY4 1105 aa9.55□□□□□ -0.88
LCN1-201ENST00000263598 TCRBV21S2A2A0A5A6 115 aa9.55□□□□□ -0.88
LCN1-201ENST00000263598 ZNF233A6NK53 670 aa9.55□□□□□ -0.88
LCN1-201ENST00000263598 SRRM3A6NNA2 597 aaPredicted RBP9.55□□□□□ -0.88
LCN1-201ENST00000263598 SGK1O00141 431 aa9.55□□□□□ -0.88
LCN1-201ENST00000263598 TOP3BO95985 862 aaKnown RBP9.55□□□□□ -0.88
LCN1-201ENST00000263598 CFIP05156 583 aa9.55□□□□□ -0.88
LCN1-201ENST00000263598 PDGFRBP09619 1106 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms