RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ALDH1A3P47895 512 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 KLHL4Q9C0H6 718 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 HIST2H2ACQ16777 129 aaPredicted RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 ZRANB3Q5FWF4 1079 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 HIST2H2AA3Q6FI13 130 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 HMGCS2P54868 508 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 KLHDC7AQ5VTJ3 777 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 SCUBE1Q8IWY4 988 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 CNPY3Q9BT09 278 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 METTL5Q9NRN9 209 aaKnown RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 EIF3LQ9Y262 564 aaKnown RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 PRIM2P49643 509 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 KLK7P49862 253 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 ATXN3P54252 364 aaPredicted RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 PSMC6P62333 389 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 PIK3R5Q8WYR1 880 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 ADAM33Q9BZ11 813 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 EXOSC4Q9NPD3 245 aaKnown RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 C6orf203Q9P0P8 240 aaPredicted RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 UBTFL6P0CB48 400 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 RDM1Q8NG50 284 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 OR2W6PQ8NHA6 318 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 ZMYND8Q9ULU4 1186 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 BOLA3Q53S33 107 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 SGO1Q5FBB7 561 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 ZNF669Q96BR6 464 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 RIT2Q99578 217 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 DGKIO75912 1065 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 THRAP10827 490 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 FCGR1AP12314 374 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 CYB5D1Q6P9G0 228 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 ATG9AQ7Z3C6 839 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 WDCPQ9H6R7 721 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 ZFYVE1Q9HBF4 777 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 HEATR9A2RTY3 570 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 ATMINO43313 823 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 GLRA3O75311 464 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 GH1P01241 217 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 RPS6P62753 249 aaKnown RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 EIF2B5Q13144 721 aaKnown RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 DGKDQ16760 1214 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 FAM182BQ5T319 152 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 SEL1L3Q68CR1 1132 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 APOL5Q9BWW9 433 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 ARID3BQ8IVW6 561 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 RTL3Q8N8U3 475 aaKnown RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 RPS6KL1Q9Y6S9 549 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 RRM2P31350 389 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 CNTN1Q12860 1018 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 RIN2Q8WYP3 895 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 THUMPD3Q9BV44 507 aaKnown RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 CINPQ9BW66 212 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 VWA5AO00534 786 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 PRLRP16471 622 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 PDK2Q15119 407 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 ZC2HC1CQ53FD0 456 aaPredicted RBP18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 FAM153AQ9UHL3 310 aa18.09■□□□□ 0.49
NOTCH3-201ENST00000263388 CNTNAP5Q8WYK1 1306 aa18.08■□□□□ 0.49
NOTCH3-201ENST00000263388 SDR42E2A6NKP2 422 aa18.08■□□□□ 0.49
NOTCH3-201ENST00000263388 CYP2C8P10632 490 aa18.08■□□□□ 0.49
NOTCH3-201ENST00000263388 MRNIPQ6NTE8 343 aa18.08■□□□□ 0.49
NOTCH3-201ENST00000263388 CCDC81Q6ZN84 652 aa18.08■□□□□ 0.49
NOTCH3-201ENST00000263388 PTPN7P35236 360 aa18.08■□□□□ 0.49
NOTCH3-201ENST00000263388 NOA1Q8NC60 698 aaKnown RBP18.08■□□□□ 0.49
NOTCH3-201ENST00000263388 MYH7BA7E2Y1 1941 aa18.08■□□□□ 0.49
NOTCH3-201ENST00000263388 O00370 1275 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 NDUFB10O96000 172 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 ODC1P11926 461 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 NQO1P15559 274 aaKnown RBP18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 CUL2Q13617 745 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 RAD9BQ6WBX8 426 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 ZNF786Q8N393 782 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 ARL4DP49703 201 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 CYP51A1Q16850 503 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 TIGD7Q6NT04 549 aaPredicted RBP18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 WWOXQ9NZC7 414 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 PHTF1Q9UMS5 762 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 CHRM3P20309 590 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 MLH1P40692 756 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 MXRA8Q9BRK3 442 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 FAM49BQ9NUQ9 324 aa18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.08■□□□□ 0.48
NOTCH3-201ENST00000263388 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 RHOBTB1O94844 696 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 SCTRP47872 440 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 SCARF1Q14162 830 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 RMND5AQ9H871 391 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 CAAP1Q9H8G2 361 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 PLAGL2Q9UPG8 496 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 TRIM49D1C9J1S8 452 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 SLCO1B7G3V0H7 640 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 ITGA4P13612 1032 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 SERPINB5P36952 375 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 NYAP1Q6ZVC0 841 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 C16orf62Q7Z3J2 963 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 RIN3Q8TB24 985 aa18.07■□□□□ 0.48
NOTCH3-201ENST00000263388 FER1L4A9Z1Z3 1794 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms