RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 PPM1NQ8N819 430 aa17.23■□□□□ 0.35
VSX2-201ENST00000261980 BBOF1Q8ND07 529 aa17.23■□□□□ 0.35
VSX2-201ENST00000261980 CFAP36Q96G28 342 aa17.23■□□□□ 0.35
VSX2-201ENST00000261980 SRPK1Q96SB4 655 aaKnown RBP17.23■□□□□ 0.35
VSX2-201ENST00000261980 TBC1D30Q9Y2I9 924 aa17.23■□□□□ 0.35
VSX2-201ENST00000261980 RREB1Q92766 1687 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 CAPN14A8MX76 684 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 MEIS2O14770 477 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 LIASO43766 372 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 SRGAP2CP0DJJ0 459 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 SRGAP2BP0DMP2 458 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 GZMAP12544 262 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 NCF2P19878 526 aaPredicted RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 MLH1P40692 756 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 RPL7AP62424 266 aaKnown RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 NFX1Q12986 1120 aaKnown RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 KCNT1Q5JUK3 1230 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 C1orf220Q5T0J3 134 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 SYDE1Q6ZW31 735 aaPredicted RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 ANKRD23Q86SG2 305 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 TRIM50Q86XT4 487 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 PPP1R14CQ8TAE6 165 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 ZNF398Q8TD17 642 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 MAF1Q9H063 256 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 COPEO14579 308 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 INHBAP08476 426 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 RXRGP48443 463 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 ENTPD1P49961 510 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 SERPINB8P50452 374 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 GRAMD4Q6IC98 578 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 NCCRP1Q6ZVX7 275 aaPredicted RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 C1orf186Q6ZWK4 172 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 PTAR1Q7Z6K3 402 aaPredicted RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 LENG9Q96B70 501 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 FIZ1Q96SL8 496 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 OLFML3Q9NRN5 406 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 SBF2Q86WG5 1849 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 ATP8B3O60423 1300 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 UGT1A9O60656 530 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 TRMUO75648 421 aaKnown RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 MAP3K6O95382 1288 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 ADRB2P07550 413 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 ALOX15P16050 662 aaPredicted RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 CC2D2BQ6DHV5 1058 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 ITPRIPL1Q6GPH6 555 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 UPF1Q92900 1129 aaKnown RBP eCLIP17.22■□□□□ 0.35
VSX2-201ENST00000261980 ZNF512Q96ME7 567 aaPredicted RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 UGT1A7Q9HAW7 530 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 UGT1A10Q9HAW8 530 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 UGT1A8Q9HAW9 530 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 BARX2Q9UMQ3 279 aaPredicted RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 RBMX2Q9Y388 322 aaKnown RBP17.22■□□□□ 0.35
VSX2-201ENST00000261980 AFG3L2Q9Y4W6 797 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 GMEB1Q9Y692 573 aa17.22■□□□□ 0.35
VSX2-201ENST00000261980 TRIM49D1C9J1S8 452 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 ALOX15BO15296 676 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 GMPRP36959 345 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 SLC1A1P43005 524 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 NSFP46459 744 aaKnown RBP17.21■□□□□ 0.35
VSX2-201ENST00000261980 DNAJC14Q6Y2X3 702 aaPredicted RBP17.21■□□□□ 0.35
VSX2-201ENST00000261980 MCOLN2Q8IZK6 566 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 MORC4Q8TE76 937 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 DCAKDQ8WVC6 231 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
VSX2-201ENST00000261980 IFT122Q9HBG6 1241 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 ACSS2Q9NR19 701 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 SOX13Q9UN79 622 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 IVNS1ABPQ9Y6Y0 642 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 TLR3O15455 904 aaKnown RBP17.21■□□□□ 0.35
VSX2-201ENST00000261980 TPD52L2O43399 206 aaKnown RBP17.21■□□□□ 0.35
VSX2-201ENST00000261980 POLR2MP0CAP2 368 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 TCN1P20061 433 aaPredicted RBP17.21■□□□□ 0.35
VSX2-201ENST00000261980 EFHC2Q5JST6 749 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 SPOPLQ6IQ16 392 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.21■□□□□ 0.35
VSX2-201ENST00000261980 PPP4R1Q8TF05 950 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
VSX2-201ENST00000261980 MAN1C1Q9NR34 630 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 HSPBP1Q9NZL4 362 aa17.21■□□□□ 0.35
VSX2-201ENST00000261980 VIL1P09327 827 aaKnown RBP17.2■□□□□ 0.34
VSX2-201ENST00000261980 FDFT1P37268 417 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 VCPP55072 806 aaKnown RBP17.2■□□□□ 0.34
VSX2-201ENST00000261980 MFAP3P55082 362 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 MRPS22P82650 360 aaKnown RBP17.2■□□□□ 0.34
VSX2-201ENST00000261980 SF3B3Q15393 1217 aaKnown RBP17.2■□□□□ 0.34
VSX2-201ENST00000261980 NRF1Q16656 503 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 RNASEH2BQ5TBB1 312 aaKnown RBP17.2■□□□□ 0.34
VSX2-201ENST00000261980 TDRPQ86YL5 185 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 DCUN1D1Q96GG9 259 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 FAM81BQ96LP2 452 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 CENPCQ03188 943 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 FAXCQ5TGI0 409 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 C16orf46Q6P387 395 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 NUDCD3Q8IVD9 361 aa17.2■□□□□ 0.34
VSX2-201ENST00000261980 RHOT1Q8IXI2 618 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms