RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PTDSS1P48651 473 aaKnown RBP23.68■■□□□ 1.38
MCF2L-201ENST00000261963 R3HDM1Q15032 1099 aaKnown RBP23.68■■□□□ 1.38
MCF2L-201ENST00000261963 WDR72Q3MJ13 1102 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 FAM43BQ6ZT52 329 aaPredicted RBP23.68■■□□□ 1.38
MCF2L-201ENST00000261963 JOSD2Q8TAC2 188 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 DDX56Q9NY93 547 aaKnown RBP23.68■■□□□ 1.38
MCF2L-201ENST00000261963 NKIRAS1Q9NYS0 192 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 TBK1Q9UHD2 729 aa23.68■■□□□ 1.38
MCF2L-201ENST00000261963 GOLGA8SH3BPF8 625 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 CDH16O75309 829 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 DDNO94850 711 aaPredicted RBP23.67■■□□□ 1.38
MCF2L-201ENST00000261963 ABHD2P08910 425 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 GM2AP17900 193 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 SP100P23497 879 aaPredicted RBP23.67■■□□□ 1.38
MCF2L-201ENST00000261963 RNASELQ05823 741 aaKnown RBP23.67■■□□□ 1.38
MCF2L-201ENST00000261963 TFDP1Q14186 410 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 STAT4Q14765 748 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 CYP4F22Q6NT55 531 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 EFCAB12Q6NXP0 572 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 NKD2Q969F2 451 aaPredicted RBP23.67■■□□□ 1.38
MCF2L-201ENST00000261963 SDCBP2Q9H190 292 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 CD19P15391 556 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 SLC25A11Q02978 314 aaKnown RBP23.67■■□□□ 1.38
MCF2L-201ENST00000261963 GPS1Q13098 491 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 CCDC142Q17RM4 750 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 WASHC2DQ5SRD0 308 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 ERP27Q96DN0 273 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 MPHOSPH6Q99547 160 aaKnown RBP23.67■■□□□ 1.38
MCF2L-201ENST00000261963 BCO2Q9BYV7 579 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 LHX5Q9H2C1 402 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 SAYSD1Q9NPB0 183 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 IRAK4Q9NWZ3 460 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 HAO1Q9UJM8 370 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 TNFSF13BQ9Y275 285 aa23.67■■□□□ 1.38
MCF2L-201ENST00000261963 GPR25O00155 361 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 NFICP08651 508 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 TARSP26639 723 aaKnown RBP23.66■■□□□ 1.38
MCF2L-201ENST00000261963 IL1R2P27930 398 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 CDH8P55286 799 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 YWHAEP62258 255 aaKnown RBP23.66■■□□□ 1.38
MCF2L-201ENST00000261963 MOB2Q70IA6 237 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 LONP2Q86WA8 852 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 KIAA0319LQ8IZA0 1049 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 C1orf127Q8N9H9 656 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 DRAXINQ8NBI3 349 aaPredicted RBP23.66■■□□□ 1.38
MCF2L-201ENST00000261963 ITFG2Q969R8 447 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 PDGFCQ9NRA1 345 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 STRIP2Q9ULQ0 834 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 AGTPBP1Q9UPW5 1226 aa23.66■■□□□ 1.38
MCF2L-201ENST00000261963 SIGLEC16A6NMB1 481 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 KRT19P08727 400 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 PSMA2P25787 234 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 PSMC4P43686 418 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 ORC1Q13415 861 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 FASTKD3Q14CZ7 662 aaKnown RBP23.65■■□□□ 1.38
MCF2L-201ENST00000261963 MUM1Q2TAK8 710 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 POLNQ7Z5Q5 900 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 ERO1BQ86YB8 467 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 SULF1Q8IWU6 871 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 SMARCAD1Q9H4L7 1026 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 RPF1Q9H9Y2 349 aaKnown RBP23.65■■□□□ 1.38
MCF2L-201ENST00000261963 DLGAP2Q9P1A6 1054 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 ANK1P16157 1881 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 CXCL11O14625 94 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 LRCH4O75427 683 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 ITGAVP06756 1048 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 KRT3P12035 628 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 TAC1P20366 129 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 GCAP28676 217 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 IREB2P48200 963 aaKnown RBP23.65■■□□□ 1.38
MCF2L-201ENST00000261963 SLC26A2P50443 739 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 MOGSQ13724 837 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 KCTD2Q14681 263 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 TMEM132AQ24JP5 1023 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 SLC35B2Q8TB61 432 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 SH3TC2Q8TF17 1288 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 DCPSQ96C86 337 aaKnown RBP23.65■■□□□ 1.38
MCF2L-201ENST00000261963 TWNKQ96RR1 684 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 MMP19Q99542 508 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 TMEM121Q9BTD3 319 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 TRIM4Q9C037 500 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 MGAMO43451 1857 aa23.65■■□□□ 1.38
MCF2L-201ENST00000261963 H0Y3Z8 333 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 HBP1O60381 514 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 LAMB3Q13751 1172 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 RNASEH2BQ5TBB1 312 aaKnown RBP23.64■■□□□ 1.38
MCF2L-201ENST00000261963 SMYD5Q6GMV2 418 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 CXorf38Q8TB03 319 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 MAML1Q92585 1016 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 LRRC37BQ96QE4 947 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 CPXM1Q96SM3 734 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 CCDC77Q9BR77 488 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 RNPEPQ9H4A4 650 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 SMYD3Q9H7B4 428 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 ADARB2Q9NS39 739 aaKnown RBP23.64■■□□□ 1.38
MCF2L-201ENST00000261963 HMGXB4Q9UGU5 601 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 MCM3APO60318 1980 aa23.64■■□□□ 1.38
MCF2L-201ENST00000261963 IL18RAPO95256 599 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 C22orf31O95567 290 aa23.64■■□□□ 1.37
MCF2L-201ENST00000261963 TXNP10599 105 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms