RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 AP3B2Q13367 1082 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 MFSD4BQ5TF39 518 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 ITPRIPL1Q6GPH6 555 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 C16orf87Q6PH81 154 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 EME1Q96AY2 570 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 KANSL3Q9P2N6 904 aa16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 SCAF8Q9UPN6 1271 aaKnown RBP16.58■□□□□ 0.25
PRPF40B-201ENST00000261897 ARHGAP10A1A4S6 786 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 PRPF4O43172 522 aaKnown RBP eCLIP16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 NADK2Q4G0N4 442 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 PPP1R2P3Q6NXS1 205 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 KLC3Q6P597 504 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 ANKS1BQ7Z6G8 1248 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 PCGF5Q86SE9 256 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 ADAM32Q8TC27 787 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 SPATA18Q8TC71 538 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 IWS1Q96ST2 819 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 PFDN4Q9NQP4 134 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 EXOC7Q9UPT5 735 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 MROH7Q68CQ1 1323 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 NDUFB10O96000 172 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 UQCRBP14927 111 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 ZBTB33Q86T24 672 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 DENND1AQ8TEH3 1009 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 SEPT10Q9P0V9 454 aa16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 HERC5Q9UII4 1024 aaKnown RBP16.58■□□□□ 0.24
PRPF40B-201ENST00000261897 UGT1A9O60656 530 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 ETFBP38117 255 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 ABCB5Q2M3G0 1257 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 LAYNQ6UX15 382 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 CEP170P1Q96L14 293 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 UNKQ9C0B0 810 aaKnown RBP16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 PAIP1Q9H074 479 aaKnown RBP16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 UGT1A7Q9HAW7 530 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 UGT1A10Q9HAW8 530 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 UGT1A8Q9HAW9 530 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 SLC24A2Q9UI40 661 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 TMCO1Q9UM00 188 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 PCDHAC2Q9Y5I4 1007 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 TM7SF2O76062 418 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 ASLP04424 464 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 STAT2P52630 851 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 GPX6P59796 221 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 NAA20P61599 178 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 DCTN2Q13561 401 aaKnown RBP16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 MORF4L2Q15014 288 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 PPIL6Q8IXY8 311 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 MARK4Q96L34 752 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 PLEKHG4BQ96PX9 1271 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 XPNPEP1Q9NQW7 623 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 ABCD1P33897 745 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 GMPRP36959 345 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 SERPINB8P50452 374 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 SH3BGRP55822 239 aaPredicted RBP16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 CRADDP78560 199 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 MPP3Q13368 585 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 FLOT2Q14254 428 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 RARS2Q5T160 578 aaKnown RBP16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 CC2D2BQ6DHV5 1058 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 NPNTQ6UXI9 565 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 SPOCD1Q6ZMY3 1216 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 NETO2Q8NC67 525 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 CD101Q93033 1021 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 THAP11Q96EK4 314 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 S100A14Q9HCY8 104 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 TSC22D4Q9Y3Q8 395 aa16.57■□□□□ 0.24
PRPF40B-201ENST00000261897 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 H3BSA7 217 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 GIPC1O14908 333 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 HSPA4LO95757 839 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 HOXA7P31268 230 aaPredicted RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 DSG3P32926 999 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 RGS2P41220 211 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 PSMC1P62191 440 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 GK3PQ14409 553 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 CEP55Q53EZ4 464 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 TNFAIP8L3Q5GJ75 292 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 DGCR14Q96DF8 476 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 IL1RAPL1Q9NZN1 696 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 SYNJ2BP-COX16A0A087WUM0 186 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 TP73O15350 636 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 KCNN4O15554 427 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 RFX1P22670 979 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 SESN2P58004 480 aaPredicted RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 ART3Q13508 389 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 CDHR3Q6ZTQ4 885 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 LPCAT2Q7L5N7 544 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 OTOP1Q7RTM1 612 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 NET1Q7Z628 596 aaPredicted RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 FAM156AQ8NDB6 213 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 FEZF2Q8TBJ5 459 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 DIS3LQ8TF46 1054 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 PTCD3Q96EY7 689 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 APOPT1Q96IL0 206 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 EHMT1Q9H9B1 1298 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 COX16Q9P0S2 106 aa16.56■□□□□ 0.24
PRPF40B-201ENST00000261897 RABGEF1Q9UJ41 708 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms