RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 NCKAP1LP55160 1127 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 GIT2Q14161 759 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 TBC1D16Q8TBP0 767 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 JADE3Q92613 823 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 MAGEB5Q9BZ81 275 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 ILKAPQ9H0C8 392 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 JPH1Q9HDC5 661 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 HUS1O60921 280 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 NTSR2O95665 410 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 SHBGP04278 402 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 FGFR3P22607 806 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 PHKA2P46019 1235 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 ST13P50502 369 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 PTK2BQ14289 1009 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 COG2Q14746 738 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 C1orf131Q8NDD1 294 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 C6orf62Q9GZU0 229 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 ARHGEF38Q9NXL2 777 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 GTF3C4Q9UKN8 822 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 A8MUI8 341 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 SPAG6O75602 509 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 TNFAIP2Q03169 654 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 AASDHQ4L235 1098 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 CDC42EP5Q6NZY7 148 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 SLC47A2Q86VL8 602 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 KBTBD2Q8IY47 623 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 STKLD1Q8NE28 680 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 KIF12Q96FN5 646 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 MMADHCQ9H3L0 296 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 RCCD1A6NED2 376 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 PSMB9P28065 219 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 GLRBP48167 497 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 KCNT1Q5JUK3 1230 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 COPS7BQ9H9Q2 264 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZNF556Q9HAH1 456 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 GPRC5CQ9NQ84 441 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 PAK5Q9P286 719 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 SESN1Q9Y6P5 492 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 SEZ6Q53EL9 994 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 RNF220Q5VTB9 566 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 MIER2Q8N344 545 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 TERB1Q8NA31 727 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 TNS3Q68CZ2 1445 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 AGRPO00253 132 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 LCA5LO95447 670 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 NRF1Q16656 503 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 ARHGAP27Q6ZUM4 889 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 RRM2BQ7LG56 351 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 KLHL23Q8NBE8 558 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 OR6Y1Q8NGX8 325 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 TCRBV5S4A2TA0A5A2 114 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 TYW5A2RUC4 315 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 SUPT3HB4E1H0 165 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 ADCY6O43306 1168 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 UPP2O95045 317 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 HSMCR30P0CW71 290 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 ATP6V1B2P21281 511 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 YY1P25490 414 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 RGS2P41220 211 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 PTENP60484 403 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 STX5Q13190 355 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 QPCTQ16769 361 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 PERM1Q5SV97 790 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 PCNX4Q63HM2 1172 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 RBM44Q6ZP01 1051 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 UBA3Q8TBC4 463 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 TCP10LQ8TDR4 215 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZNF669Q96BR6 464 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 WRNIP1Q96S55 665 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 CBWD1Q9BRT8 395 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 STAP1Q9ULZ2 295 aa10.1□□□□□ -0.79
CTDSPL2-201ENST00000260327 LMTK2Q8IWU2 1503 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 PPARGP37231 505 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 MCL1Q07820 350 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 CRELD2Q6UXH1 353 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 CBWD2Q8IUF1 395 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 NDNQ99608 321 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 ROGDIQ9GZN7 287 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 STK39Q9UEW8 545 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 MYRFQ9Y2G1 1151 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 MAFGO15525 162 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 CYTH3O43739 400 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 POLBP06746 335 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 PSMC6P62333 389 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 CCDC80Q76M96 950 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZSWIM2Q8NEG5 633 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 LENG1Q96BZ8 264 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 FAM167AQ96KS9 214 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 EPAS1Q99814 870 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 TMEM121Q9BTD3 319 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 SCAF8Q9UPN6 1271 aaKnown RBP10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 AGAP1Q9UPQ3 857 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 SNX3O60493 162 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 DDHD2O94830 711 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 PRKCBP05771 671 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 CYP11B1P15538 503 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 ALOX12P18054 663 aa10.09□□□□□ -0.79
CTDSPL2-201ENST00000260327 PKN2Q16513 984 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms