RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 CELF6Q96J87 481 aaKnown RBP6.63□□□□□ -1.35
BRIP1-201ENST00000259008 TTPALQ9BTX7 342 aa6.63□□□□□ -1.35
BRIP1-201ENST00000259008 SPATA16Q9BXB7 569 aa6.63□□□□□ -1.35
BRIP1-201ENST00000259008 BARX2Q9UMQ3 279 aaPredicted RBP6.63□□□□□ -1.35
BRIP1-201ENST00000259008 LTBP3Q9NS15 1303 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SMIM35A0A1B0GVV1 85 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 NEDD8-MDP1E9PL57 170 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ZNF197O14709 1029 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 KDM1AO60341 852 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 MICAL2O94851 1124 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 MX2P20592 715 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TARBP2Q15633 366 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 NOL9Q5SY16 702 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 CHPFQ8IZ52 775 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 KCTD17Q8N5Z5 321 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ST13P5Q8NFI4 369 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 KAT2BQ92831 832 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ATP13A1Q9HD20 1204 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 NT5MQ9NPB1 228 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 NRXN3Q9Y4C0 1643 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 RNF40O75150 1001 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 OR4Q2P0C623 313 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 KITP10721 976 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ARID5BQ14865 1188 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 PDK1Q15118 436 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SLC24A5Q71RS6 500 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 MSL3Q8N5Y2 521 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 PTPRN2Q92932 1015 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 BADQ92934 168 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TATDN2Q93075 761 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 MYLPFQ96A32 169 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 LRGUKQ96M69 825 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 C11orf84Q9BUA3 381 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 GOLGA2P5Q9HBQ8 144 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ARHGEF38Q9NXL2 777 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 CPSF2Q9P2I0 782 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 PHRF1Q9P1Y6 1649 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 KIF3CO14782 793 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 STX7O15400 261 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TBL1XO60907 577 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ATP5BP06576 529 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 CAPSQ13938 189 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 FBXL19Q6PCT2 694 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 DCLRE1AQ6PJP8 1040 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 DENND5BQ6ZUT9 1274 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 DSG4Q86SJ6 1040 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TEKT4Q8WW24 435 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 RFFLQ8WZ73 363 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 FAM136AQ96C01 138 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SPACA7Q96KW9 195 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SMYD3Q9H7B4 428 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 AKAP7Q9P0M2 348 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 NDOR1Q9UHB4 597 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 PYCARDQ9ULZ3 195 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ANKRD26Q9UPS8 1709 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 CDY1Q9Y6F8 540 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SLC9A3R1O14745 358 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TTI1O43156 1089 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 MYO1DO94832 1006 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ATP1A1P05023 1023 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 CCR1P32246 355 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ATP5C1P36542 298 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SLC1A1P43005 524 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TOB1P50616 345 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 PTPN11Q06124 597 aaPredicted RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 CAPRIN1Q14444 709 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SLC45A4Q5BKX6 768 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ZNF618Q5T7W0 954 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 NPAS4Q8IUM7 802 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SCUBE3Q8IX30 993 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 DDIASQ8IXT1 998 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 USP38Q8NB14 1042 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 FEZF2Q8TBJ5 459 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TFB1MQ8WVM0 346 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 UBXN6Q9BZV1 441 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 GTF3C4Q9UKN8 822 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 DIS3Q9Y2L1 958 aaKnown RBP6.62□□□□□ -1.35
BRIP1-201ENST00000259008 GIT1Q9Y2X7 761 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 C2orf81A6NN90 581 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 GNGT2O14610 69 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SMIM24O75264 130 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 COPS2P61201 443 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 PTK7Q13308 1070 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SPDYE7PQ495Y7 208 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TMC5Q6UXY8 1006 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 NT5DC3Q86UY8 548 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 TRIM59Q8IWR1 403 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 CPA6Q8N4T0 437 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 EMC1Q8N766 993 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 LPCAT1Q8NF37 534 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 DBF4BQ8NFT6 615 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 FAM71BQ8TC56 605 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 AGR3Q8TD06 166 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 AUTS2Q8WXX7 1259 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 PPP1R36Q96LQ0 422 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 ZBTB18Q99592 522 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 SLC13A1Q9BZW2 595 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 MAN1C1Q9NR34 630 aa6.62□□□□□ -1.35
BRIP1-201ENST00000259008 CD274Q9NZQ7 290 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms