RNA–Protein interactions for RNA: ENST00000256495.3

BHLHE40-201, Transcript of basic helix-loop-helix family member e40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BHLHE40, Length 3,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE40-201ENST00000256495 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 NEFHP12036 1026 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 SLC1A1P43005 524 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 PITX1P78337 314 aaPredicted RBP13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 PTGISQ16647 500 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 CASC4Q6P4E1 433 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 SCN4BQ8IWT1 228 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 ATP6V1G3Q96LB4 118 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 ADAMTS10Q9H324 1103 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 FAM53CQ9NYF3 392 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 RLFQ13129 1914 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 RGPD3A6NKT7 1758 aaPredicted RBP13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 RGPD4Q7Z3J3 1758 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 GOLGA8KD6RF30 607 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 PODXLO00592 558 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 PECAM1P16284 738 aaPredicted RBP13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 KRT15P19012 456 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 PTGIRP43119 386 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 EIF3EP60228 445 aaKnown RBP13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 FKBP1BP68106 108 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 C9orf57Q5W0N0 161 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 XYLT1Q86Y38 959 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 CTAGE3PQ8IX95 158 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 C3orf20Q8ND61 904 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 B3GALT6Q96L58 329 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 APBA2Q99767 749 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 ADAM2Q99965 735 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 TRPV6Q9H1D0 765 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
BHLHE40-201ENST00000256495 AVILO75366 819 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 GPD2P43304 727 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 IRAK1P51617 712 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 FCGRTP55899 365 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 PURAQ00577 322 aaKnown RBP13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 CAP1Q01518 475 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 PDIA2Q13087 525 aaKnown RBP13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 CA9Q16790 459 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 ZDHHC24Q6UX98 284 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 SIX6OS1Q8N1H7 587 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 GRHL1Q9NZI5 618 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 STRIP2Q9ULQ0 834 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 PMM2O15305 246 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 VDRP11473 427 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 C17orf99Q6UX52 265 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 CPLX4Q7Z7G2 160 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 FAM228AQ86W67 206 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 ZNF354CQ86Y25 554 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 CAVIN3Q969G5 261 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
BHLHE40-201ENST00000256495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 NT5C1B-RDH14C9J2C7 533 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 BEST1O76090 585 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 MOCS2O96007 188 aaPredicted RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 GNAT1P11488 350 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 TAF6P49848 677 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 SLC8A3P57103 927 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 PIGHQ14442 188 aaPredicted RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 TFDP3Q5H9I0 405 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 P3H4Q92791 437 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 RBM41Q96IZ5 413 aaKnown RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 DDX43Q9NXZ2 648 aaKnown RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 ITGA11Q9UKX5 1188 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 UBQLN1Q9UMX0 589 aaKnown RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 E2F8A0AVK6 867 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 KCNN4O15554 427 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 GPD1P21695 349 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 GRM5P41594 1212 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 RSPH3Q86UC2 560 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 SNF8Q96H20 258 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 AGAP3Q96P47 875 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 TRIM56Q9BRZ2 755 aaKnown RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 MIOSQ9NXC5 875 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 FAM187AA6NFU0 413 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 FSCN2O14926 492 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 APRTP07741 180 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 LRRC31Q6UY01 552 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 ZNF572Q7Z3I7 529 aaPredicted RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 ZNF410Q86VK4 478 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 UNC45BQ8IWX7 931 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 ARFGAP1Q8N6T3 406 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 TSPYL2Q9H2G4 693 aaPredicted RBP13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 NEU2Q9Y3R4 380 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
BHLHE40-201ENST00000256495 MCF2LO15068 1137 aa13.15□□□□□ -0.3
BHLHE40-201ENST00000256495 HMGCRP04035 888 aa13.15□□□□□ -0.3
BHLHE40-201ENST00000256495 SRGAP2BP0DMP2 458 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms