RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 FAM182AQ5T1J6 154 aa11.84□□□□□ -0.51
PDE6B-201ENST00000255622 MFSD7Q6UXD7 560 aa11.84□□□□□ -0.51
PDE6B-201ENST00000255622 SYDE1Q6ZW31 735 aaPredicted RBP11.84□□□□□ -0.51
PDE6B-201ENST00000255622 TEX9Q8N6V9 391 aa11.84□□□□□ -0.51
PDE6B-201ENST00000255622 PPFIBP2Q8ND30 876 aa11.84□□□□□ -0.51
PDE6B-201ENST00000255622 ZNF606Q8WXB4 792 aa11.84□□□□□ -0.51
PDE6B-201ENST00000255622 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDE6B-201ENST00000255622 C10orf88Q9H8K7 445 aa11.84□□□□□ -0.51
PDE6B-201ENST00000255622 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
PDE6B-201ENST00000255622 GMEB1Q9Y692 573 aa11.84□□□□□ -0.51
PDE6B-201ENST00000255622 STYXL1Q9Y6J8 313 aa11.84□□□□□ -0.51
PDE6B-201ENST00000255622 NFASCO94856 1347 aa11.83□□□□□ -0.51
PDE6B-201ENST00000255622 A0A0B4J269 797 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 BANF1O75531 89 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 OAS1P00973 400 aaKnown RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 CCDC166P0CW27 439 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 GHRP10912 638 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 MAN1A1P33908 653 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 ZNF280AP59817 542 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 PHEXP78562 749 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 MTM1Q13496 603 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 CYP4A22Q5TCH4 519 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 ZNF772Q68DY9 489 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 SCARA5Q6ZMJ2 495 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 FEZF2Q8TBJ5 459 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 MTMR12Q9C0I1 747 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 DHX33Q9H6R0 707 aaKnown RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 ACAD9Q9H845 621 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 KIAA1586Q9HCI6 787 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 MRPL47Q9HD33 250 aaKnown RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 SAE1Q9UBE0 346 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 TDRKHQ9Y2W6 561 aaKnown RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 ARIH1Q9Y4X5 557 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 DOCK1Q14185 1865 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 DKC1O60832 514 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 SPAG7O75391 227 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 PIAS1O75925 651 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 DNAJC8O75937 253 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 KRT1P04264 644 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 SP100P23497 879 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 MCL1Q07820 350 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 CAPSQ13938 189 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 CGB2Q6NT52 195 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 ZCCHC8Q6NZY4 707 aaKnown RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 PHF13Q86YI8 300 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 CCDC89Q8N998 374 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 EXD1Q8NHP7 514 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 SLC7A3Q8WY07 619 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 SNX27Q96L92 541 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 SLITRK1Q96PX8 696 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 TGS1Q96RS0 853 aaKnown RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 CGRRF1Q99675 332 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 TEX13BQ9BXU2 312 aa11.83□□□□□ -0.52
PDE6B-201ENST00000255622 MAFBQ9Y5Q3 323 aaPredicted RBP11.83□□□□□ -0.52
PDE6B-201ENST00000255622 LIASO43766 372 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 PENKP01210 267 aaPredicted RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 RXRBP28702 533 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 ARL2P36404 184 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 TAB3Q8N5C8 712 aaPredicted RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 VPS37AQ8NEZ2 397 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 C2orf49Q9BVC5 232 aaPredicted RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 NSRP1Q9H0G5 558 aaKnown RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 SAYSD1Q9NPB0 183 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 PARVAQ9NVD7 372 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 PNMA3Q9UL41 463 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 ZNF148Q9UQR1 794 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 USP15Q9Y4E8 981 aaPredicted RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 ADGRA2Q96PE1 1338 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 GOLGA8SH3BPF8 625 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 GOLGA8MH3BSY2 632 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 ITGBL1O95965 494 aaPredicted RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 WEE2P0C1S8 567 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 MMP8P22894 467 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 MAGEA4P43358 317 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 NAMPTP43490 491 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 MYL6P60660 151 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 KCNJ2P63252 427 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 EEPD1Q7L9B9 569 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 P3H4Q92791 437 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 L3MBTL3Q96JM7 780 aaPredicted RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 ETNK2Q9NVF9 386 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 MOSPD1Q9UJG1 213 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 IQCA1LA6NCM1 817 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 NFKBIEO00221 500 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 MAGEB3O15480 346 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 ATP2A2P16615 1042 aaKnown RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 GCAP28676 217 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 STX2P32856 288 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 ARSEP51690 589 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 TGFB2P61812 414 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 CAV1Q03135 178 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 GAD2Q05329 585 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 SMTNL2Q2TAL5 461 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 DLK2Q6UY11 383 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 FAM47EQ6ZV65 393 aa11.82□□□□□ -0.52
PDE6B-201ENST00000255622 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
PDE6B-201ENST00000255622 CKAP2Q8WWK9 683 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms