RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 NEBLO76041 1014 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 HOXC6P09630 235 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 SRGAP2CP0DJJ0 459 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 MARK3P27448 753 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 BLMHQ13867 455 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 SYCP2LQ5T4T6 812 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 TRIM68Q6AZZ1 485 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 SAMD7Q7Z3H4 446 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 FNIP1Q8TF40 1166 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 CYTH2Q99418 400 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 CADM1Q9BY67 442 aaKnown RBP17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 TRIM55Q9BYV6 548 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 PICK1Q9NRD5 415 aa17.88■□□□□ 0.45
SLC52A1-201ENST00000254853 CFAP69A5D8W1 941 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 EIF4E1BA6NMX2 242 aaKnown RBP17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 APOC4-APOC2K7ER74 178 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 ABLIM1O14639 778 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 APOC2P02655 101 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 ERBB2P04626 1255 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 RBP3P10745 1247 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 UBA1P22314 1058 aaKnown RBP17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 MIPP30301 263 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 ZNF280AP59817 542 aaPredicted RBP17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 PTK7Q13308 1070 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 XYLT1Q86Y38 959 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 MICAL1Q8TDZ2 1067 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 PRR11Q96HE9 360 aaPredicted RBP17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 WRNIP1Q96S55 665 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 LHX5Q9H2C1 402 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 HACL1Q9UJ83 578 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 TCRBV9S1A1TA0A576 114 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 MAFO75444 373 aaPredicted RBP17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 HAUS5O94927 633 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 LUC7L3O95232 432 aaKnown RBP17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 DHRS4L1P0CG22 281 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 TSHRP16473 764 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 NEK3P51956 506 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 CDH8P55286 799 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 OSTNP61366 133 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 FAAP100Q0VG06 881 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 NPNTQ6UXI9 565 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 CATSPERGQ6ZRH7 1159 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 TMEM130Q8N3G9 435 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 PTCD3Q96EY7 689 aaKnown RBP17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 C12orf42Q96LP6 360 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 FAM111AQ96PZ2 611 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 CALN1Q9BXU9 219 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 SYNCQ9H7C4 482 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 KCNK13Q9HB14 408 aa17.87■□□□□ 0.45
SLC52A1-201ENST00000254853 IQANK1A0A1B0GTG1 560 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 KBTBD13C9JR72 458 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 MCF2LO15068 1137 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 HNRNPCL1O60812 293 aaKnown RBP17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 PRKCBP05771 671 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 ETV4P43268 484 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 STAT5BP51692 787 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 EFNA5P52803 228 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 ARFIP2P53365 341 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 KBTBD12Q3ZCT8 623 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 PRAMEF18Q5VWM3 479 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 C4orf50Q6ZRC1 276 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 CMASQ8NFW8 434 aaPredicted RBP17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 SPATA18Q8TC71 538 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 TTC17Q96AE7 1141 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 SPDL1Q96EA4 605 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 TMEM120AQ9BXJ8 343 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 LCTP09848 1927 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 LIN7AO14910 233 aaPredicted RBP17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 FARP2O94887 1054 aaPredicted RBP17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 BGNP21810 368 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 SERPINB3P29508 390 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 PTDSS1P48651 473 aaKnown RBP17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 MMRN1Q13201 1228 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 SH2D5Q6ZV89 423 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 SLC44A1Q8WWI5 657 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 APOPT1Q96IL0 206 aa17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 FBXO6Q9NRD1 293 aaPredicted RBP17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 RPL26L1Q9UNX3 145 aaKnown RBP17.86■□□□□ 0.45
SLC52A1-201ENST00000254853 DOCK1Q14185 1865 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 SMAPO00193 183 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 MED7O43513 233 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 PEX10O60683 326 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 CCDC22O60826 627 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 TRUB2O95900 331 aaKnown RBP17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 TNNC2P02585 160 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 PYGBP11216 843 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 YWHAGP61981 247 aaKnown RBP eCLIP17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 ZNF200P98182 395 aaPredicted RBP17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 LAMTOR4Q0VGL1 99 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 PRKD1Q15139 912 aaPredicted RBP17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 SURF1Q15526 300 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 KHDC1Q4VXA5 237 aaKnown RBP17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 ZC3H18Q86VM9 953 aaKnown RBP17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 CDR2LQ86X02 465 aaPredicted RBP17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 CHSY1Q86X52 802 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 CEP120Q8N960 986 aa17.85■□□□□ 0.45
SLC52A1-201ENST00000254853 RNF149Q8NC42 400 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms