RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 KCTD2Q14681 263 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 SLC10A6Q3KNW5 377 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 CFAP157Q5JU67 520 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 DRICH1Q6PGQ1 229 aaPredicted RBP9.64□□□□□ -0.87
RPA1-201ENST00000254719 TMEM270Q6UE05 265 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 ILDR2Q71H61 639 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 BNIPLQ7Z465 357 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 XYLT1Q86Y38 959 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 AFAP1L2Q8N4X5 818 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 MCUR1Q96AQ8 359 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 FAXDC2Q96IV6 333 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 C11orf70Q9BRQ4 267 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 ZNF302Q9NR11 478 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 CISHQ9NSE2 258 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 STK38LQ9Y2H1 464 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 PRKCGP05129 697 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 YARSP54577 528 aaKnown RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 NEDD9Q14511 834 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 KYAT1Q16773 422 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 CENPUQ71F23 418 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 FITM2Q8N6M3 262 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 NAT8LQ8N9F0 302 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 DPF3Q92784 378 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 SPDL1Q96EA4 605 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 MS4A4AQ96JQ5 239 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 ANLNQ9NQW6 1124 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 ADAM22Q9P0K1 906 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 SENP1Q9P0U3 644 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 IRX4P78413 519 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 CELF3Q5SZQ8 465 aaKnown RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 SWT1Q5T5J6 900 aaKnown RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 THEMIS2Q5TEJ8 643 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 ALKAL1Q6UXT8 129 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 TRMT10CQ7L0Y3 403 aaKnown RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 APOBEC3FQ8IUX4 373 aaKnown RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 RHOT1Q8IXI2 618 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 ALLCQ8N6M5 410 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 GRAMD1AQ96CP6 724 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 DDX56Q9NY93 547 aaKnown RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 GTF2IRD1Q9UHL9 959 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 A0A1W2PPM1 405 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 C19orf81C9J6K1 198 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 ASMTLO95671 621 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 KRT1P04264 644 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 EFNA5P52803 228 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 TNFAIP2Q03169 654 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 GRM1Q13255 1194 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 PRKG1Q13976 671 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 ZBTB6Q15916 424 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 PTPRN2Q92932 1015 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 PRR11Q96HE9 360 aaPredicted RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 MSTO1Q9BUK6 570 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 SMYD3Q9H7B4 428 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 USP29Q9HBJ7 922 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 TMEM30AQ9NV96 361 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 MTMR10Q9NXD2 777 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 TTC3P53804 2025 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 MCF2LO15068 1137 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 AGTP01019 485 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 NCOA4Q13772 614 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 TFDP2Q14188 446 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 TRIM68Q6AZZ1 485 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 ROPN1BQ9BZX4 212 aaPredicted RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 ROPN1Q9HAT0 212 aaPredicted RBP9.63□□□□□ -0.87
RPA1-201ENST00000254719 TXLNGQ9NUQ3 528 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 IP6K2Q9UHH9 426 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 PNMA3Q9UL41 463 aa9.63□□□□□ -0.87
RPA1-201ENST00000254719 E7ESA3 106 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 SMAPO00193 183 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 HOXD8P13378 290 aaPredicted RBP9.62□□□□□ -0.87
RPA1-201ENST00000254719 OSBPP22059 807 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 C1QBPQ07021 282 aaKnown RBP9.62□□□□□ -0.87
RPA1-201ENST00000254719 XRCC4Q13426 336 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 MAP3K21Q5TCX8 1036 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 BZW1Q7L1Q6 419 aaKnown RBP9.62□□□□□ -0.87
RPA1-201ENST00000254719 EEPD1Q7L9B9 569 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 SULF1Q8IWU6 871 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 FBXO16Q8IX29 292 aaPredicted RBP9.62□□□□□ -0.87
RPA1-201ENST00000254719 VPS52Q8N1B4 723 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 MGARPQ8TDB4 240 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 CPT1BQ92523 772 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 CDKL2Q92772 493 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 CDT1Q9H211 546 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 RNF19AQ9NV58 838 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 TRIM33Q9UPN9 1127 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 NAALADL1Q9UQQ1 740 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 B4GALT4O60513 344 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 CD1EP15812 388 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 TAC1P20366 129 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 SLC10A2Q12908 348 aaPredicted RBP9.62□□□□□ -0.87
RPA1-201ENST00000254719 LRRC14Q15048 493 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 CCNG2Q16589 344 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 VCPIP1Q96JH7 1222 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 C20orf27Q9GZN8 174 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 PDZD7Q9H5P4 517 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 KCNK13Q9HB14 408 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 SMYD2Q9NRG4 433 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 USP3Q9Y6I4 520 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 SNX3O60493 162 aa9.62□□□□□ -0.87
RPA1-201ENST00000254719 GNA15P30679 374 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms