RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 OSBPL1AQ9BXW6 950 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CDH16O75309 829 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 PMPCBO75439 489 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 APOA4P06727 396 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CENPPQ6IPU0 288 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 DEFB128Q7Z7B8 93 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CLEC4FQ8N1N0 589 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 UCMAQ8WVF2 138 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CYFIP2Q96F07 1278 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 TMEM176AQ96HP8 235 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 ZFP42Q96MM3 310 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 ERGIC2Q96RQ1 377 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 NDEL1Q9GZM8 345 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 TLR8Q9NR97 1041 aaKnown RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 PDGFCQ9NRA1 345 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 EIF3LQ9Y262 564 aaKnown RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 USP15Q9Y4E8 981 aaPredicted RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 TBKBP1A7MCY6 615 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 LZTS3O60299 673 aaPredicted RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 FKBP9O95302 570 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 ACADMP11310 421 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 TGM2P21980 687 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 KLRC1P26715 233 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 EFEMP1Q12805 493 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 TTLL9Q3SXZ7 439 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 MROH9Q5TGP6 573 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 POTEAQ6S8J7 498 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 FKBP9P1Q75LS8 142 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 ADGRA1Q86SQ6 560 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 WDR48Q8TAF3 677 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 FICDQ9BVA6 458 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 IL1RL2Q9HB29 575 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 NMRK2Q9NPI5 230 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 SNTG2Q9NY99 539 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 H2AFY2Q9P0M6 372 aaPredicted RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 STX7O15400 261 aaKnown RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 DGKIO75912 1065 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 RHOCP08134 193 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 SLC26A2P50443 739 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 KPNA1P52294 538 aaPredicted RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CNGA3Q16281 694 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 C6orf10Q5SRN2 563 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 AGAP9Q5VTM2 703 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CCNI2Q6ZMN8 369 aaPredicted RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CBWD2Q8IUF1 395 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 IARS2Q9NSE4 1012 aaKnown RBP9.03□□□□□ -0.96
PTCD3-201ENST00000254630 DCDC2Q9UHG0 476 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CYTH3O43739 400 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 ALDH1A2O94788 518 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 AMHP03971 560 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 RAB27AP51159 221 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CLEC16AQ2KHT3 1053 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 FAM83EQ2M2I3 478 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 NBPF20Q3BBV1 942 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 SGSM3Q96HU1 749 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 WNK4Q96J92 1243 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 NFKBIZQ9BYH8 718 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CDY2AQ9Y6F7 541 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 CDY1Q9Y6F8 540 aa9.03□□□□□ -0.96
PTCD3-201ENST00000254630 NCF1BA6NI72 391 aaPredicted RBP9.02□□□□□ -0.96
PTCD3-201ENST00000254630 NCF1CA8MVU1 366 aaPredicted RBP9.02□□□□□ -0.96
PTCD3-201ENST00000254630 NFIBO00712 420 aa9.02□□□□□ -0.96
PTCD3-201ENST00000254630 AIM2O14862 343 aa9.02□□□□□ -0.96
PTCD3-201ENST00000254630 NCF1P14598 390 aaPredicted RBP9.02□□□□□ -0.96
PTCD3-201ENST00000254630 BST2Q10589 180 aaKnown RBP9.02□□□□□ -0.96
PTCD3-201ENST00000254630 TFDP3Q5H9I0 405 aa9.02□□□□□ -0.96
PTCD3-201ENST00000254630 ZNF280DQ6N043 979 aa9.02□□□□□ -0.96
PTCD3-201ENST00000254630 CCDC33Q8N5R6 958 aa9.02□□□□□ -0.96
PTCD3-201ENST00000254630 DPF3Q92784 378 aa9.02□□□□□ -0.96
PTCD3-201ENST00000254630 DTNAQ9Y4J8 743 aa9.02□□□□□ -0.96
PTCD3-201ENST00000254630 MORC2Q9Y6X9 1032 aaPredicted RBP9.02□□□□□ -0.96
PTCD3-201ENST00000254630 MST1RQ04912 1400 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 DDTLA6NHG4 134 aaPredicted RBP9.02□□□□□ -0.97
PTCD3-201ENST00000254630 ANKRD65E5RJM6 399 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 MYO1CO00159 1063 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 CYP11B1P15538 503 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 PTPN7P35236 360 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 FNTAP49354 379 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 NFIAQ12857 509 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 E2F7Q96AV8 911 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 XPO6Q96QU8 1125 aaKnown RBP9.02□□□□□ -0.97
PTCD3-201ENST00000254630 ERP44Q9BS26 406 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 FAM167BQ9BTA0 163 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 UBE2OQ9C0C9 1292 aaKnown RBP9.02□□□□□ -0.97
PTCD3-201ENST00000254630 MRGBPQ9NV56 204 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 TRPM5Q9NZQ8 1165 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 MANSC4A6NHS7 340 aaPredicted RBP9.02□□□□□ -0.97
PTCD3-201ENST00000254630 PCNAP12004 261 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 MYL4P12829 197 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 MTFR1Q15390 333 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 BOLA3Q53S33 107 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 TRIM65Q6PJ69 517 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 METTL7BQ6UX53 244 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 SLC30A10Q6XR72 485 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 ADCK1Q86TW2 530 aa9.02□□□□□ -0.97
PTCD3-201ENST00000254630 C4orf19Q8IY42 314 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms