RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KBTBD4Q9NVX7 518 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 GCNT4Q9P109 453 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 GTF3C4Q9UKN8 822 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 SNX9Q9Y5X1 595 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 PRPF6O94906 941 aaKnown RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 PCSK1P29120 753 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 GJA4P35212 333 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 LHX1P48742 406 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 RBP5P82980 135 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 CEBPZQ03701 1054 aaKnown RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 FAM160A1Q05DH4 1040 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 PDGFRLQ15198 375 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 LMBRD2Q68DH5 695 aaPredicted RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 NAIF1Q69YI7 327 aaPredicted RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 EPM2AIP1Q7L775 607 aaPredicted RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 DPH6Q7L8W6 267 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 CBWD2Q8IUF1 395 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 SYCP3Q8IZU3 236 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 CSGALNACT2Q8N6G5 542 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 GAB3Q8WWW8 586 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 CEP295NLQ96MC4 621 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 TRIM9Q9C026 710 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 GZF1Q9H116 711 aaPredicted RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 TNMDQ9H2S6 317 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 PCIF1Q9H4Z3 704 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 CRTAC1Q9NQ79 661 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 UXTQ9UBK9 157 aaPredicted RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 FRYQ5TBA9 3013 aa11.05□□□□□ -0.64
VPS50-201ENST00000251739 TNRC6BQ9UPQ9 1833 aaKnown RBP11.05□□□□□ -0.64
VPS50-201ENST00000251739 IGF2RP11717 2491 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 DCDC2BA2VCK2 349 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
VPS50-201ENST00000251739 AKAP3O75969 853 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 EPN2O95208 641 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 EGFP01133 1207 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 TMEM191BP0C7N4 346 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 RAP1GAPP47736 663 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 EHHADHQ08426 723 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 GRSF1Q12849 480 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS50-201ENST00000251739 MTF1Q14872 753 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 EML3Q32P44 896 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 BLOC1S3Q6QNY0 202 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 VSTM1Q6UX27 236 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 CCDC65Q8IXS2 484 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 PDILTQ8N807 584 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 LINC00301Q8NCQ3 95 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 OSCP1Q8WVF1 389 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 LOXL4Q96JB6 756 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 SPATA17Q96L03 361 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 SYT15Q9BQS2 421 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 TTLL2Q9BWV7 592 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 PANK2Q9BZ23 570 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 ZSCAN16Q9H4T2 348 aaPredicted RBP11.04□□□□□ -0.64
VPS50-201ENST00000251739 ECT2Q9H8V3 914 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 MAGED2Q9UNF1 606 aaPredicted RBP11.04□□□□□ -0.64
VPS50-201ENST00000251739 NME7Q9Y5B8 376 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 THADAQ6YHU6 1953 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 GON4LQ3T8J9 2241 aa11.04□□□□□ -0.64
VPS50-201ENST00000251739 PI4KAP42356 2102 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 C2orf78A6NCI8 922 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 EIF3DO15371 548 aaKnown RBP eCLIP11.03□□□□□ -0.64
VPS50-201ENST00000251739 TGFB1I1O43294 461 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 STX6O43752 255 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 GDF9O60383 454 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 ATG13O75143 517 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 ATP2C2O75185 946 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 OLFM2O95897 454 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 CKMP06732 381 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 ADRB1P08588 477 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 KRT19P08727 400 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 USP17L7P0C7H9 530 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 DRD1P21728 446 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 WARSP23381 471 aaKnown RBP11.03□□□□□ -0.64
VPS50-201ENST00000251739 LMO2P25791 158 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 PXNP49023 591 aaPredicted RBP11.03□□□□□ -0.64
VPS50-201ENST00000251739 PSMC1P62191 440 aaKnown RBP11.03□□□□□ -0.64
VPS50-201ENST00000251739 ZXDBP98169 803 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 SURF1Q15526 300 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 GAB4Q2WGN9 574 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 PLA2G2CQ5R387 149 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 C4orf50Q6ZRC1 276 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 SPATA2LQ8IUW3 424 aaPredicted RBP11.03□□□□□ -0.64
VPS50-201ENST00000251739 WDR49Q8IV35 697 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 CPA6Q8N4T0 437 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 CAMKK1Q8N5S9 505 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 ZNF507Q8TCN5 953 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 ATP2A3Q93084 1043 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 MYLPFQ96A32 169 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 HPDLQ96IR7 371 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 ANKRD36BP1Q96IX9 119 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 ZC3H10Q96K80 434 aaKnown RBP11.03□□□□□ -0.64
VPS50-201ENST00000251739 CYP2S1Q96SQ9 504 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 P2RY13Q9BPV8 354 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 CUEDC2Q9H467 287 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 TMEM30AQ9NV96 361 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 HSPBP1Q9NZL4 362 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 CDH9Q9ULB4 789 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 ARHGAP26Q9UNA1 814 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms