RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PRR11Q96HE9 360 aaPredicted RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 GPR20Q99678 358 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 BCO2Q9BYV7 579 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 ELOVL4Q9GZR5 314 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 GGA3Q9NZ52 723 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 NXF1Q9UBU9 619 aaKnown RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 USH1CQ9Y6N9 552 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 CCDC160A6NGH7 325 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 SIGLEC16A6NMB1 481 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 E7ESA3 106 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 CNMDO75829 334 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 PSMA2P25787 234 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 ABCD1P33897 745 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 SMAD1Q15797 465 aaKnown RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 DUOXA2Q1HG44 320 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 CTC1Q2NKJ3 1217 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 SGSM1Q2NKQ1 1148 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 PPP1R21Q6ZMI0 780 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 SH2D5Q6ZV89 423 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 POLNQ7Z5Q5 900 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 TCHPQ9BT92 498 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 MRPL4Q9BYD3 311 aaKnown RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 NKX1-2Q9UD57 310 aaPredicted RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 PCSK1NQ9UHG2 260 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 hCG_2014768A0A024R1R8 64 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 GOLGA8RI6L899 631 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 GPR25O00155 361 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 PIK3R2O00459 728 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 AVILO75366 819 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 USP2O75604 605 aaPredicted RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 KRT3P12035 628 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 SLC18A1P54219 525 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 YARSP54577 528 aaKnown RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 CCDC15Q0P6D6 951 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 VGLL4Q14135 290 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 HIF1AQ16665 826 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 CES4AQ5XG92 561 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 MAP1SQ66K74 1059 aaPredicted RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 TSHZ1Q6ZSZ6 1077 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 BBS12Q6ZW61 710 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 FBXO36Q8NEA4 188 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
COPB1-201ENST00000249923 ZNF570Q96NI8 536 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 FOXP3Q9BZS1 431 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 TXNRD2Q9NNW7 524 aa10.6□□□□□ -0.71
COPB1-201ENST00000249923 RHPN2Q8IUC4 686 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 FAM71DQ8N9W8 422 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 ARMC2Q8NEN0 867 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 ZNF518BQ9C0D4 1074 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 HOXC10Q9NYD6 342 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 ZSWIM8A7E2V4 1837 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 KIF1CO43896 1103 aaKnown RBP10.59□□□□□ -0.71
COPB1-201ENST00000249923 CBX6O95503 412 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 CA4P22748 312 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 MIPP30301 263 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 IL9RQ01113 521 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 LMNB2Q03252 620 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 MBTD1Q05BQ5 628 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 NOL9Q5SY16 702 aaKnown RBP10.59□□□□□ -0.71
COPB1-201ENST00000249923 LVRNQ6Q4G3 990 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 ADGRD1Q6QNK2 874 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 METTL7BQ6UX53 244 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 CYTH2Q99418 400 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 PAFAH2Q99487 392 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 TRIM56Q9BRZ2 755 aaKnown RBP10.59□□□□□ -0.71
COPB1-201ENST00000249923 CDT1Q9H211 546 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 FZD8Q9H461 694 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 HAO1Q9UJM8 370 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 NME7Q9Y5B8 376 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 TRIP11Q15643 1979 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 B4GALT4O60513 344 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 BAG2O95816 211 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 CLCN3P51790 818 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 CHST13Q8NET6 341 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 ZNF75CPQ92670 426 aaPredicted RBP10.59□□□□□ -0.71
COPB1-201ENST00000249923 SERAC1Q96JX3 654 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 TTC25Q96NG3 672 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 IFT122Q9HBG6 1241 aa10.59□□□□□ -0.71
COPB1-201ENST00000249923 PSMC3IPQ9P2W1 217 aaPredicted RBP10.59□□□□□ -0.71
COPB1-201ENST00000249923 IL4RP24394 825 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 GEMIN4P57678 1058 aaKnown RBP10.58□□□□□ -0.72
COPB1-201ENST00000249923 PSMC1P62191 440 aaKnown RBP10.58□□□□□ -0.72
COPB1-201ENST00000249923 RASA2Q15283 850 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 MPZL3Q6UWV2 235 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 C3orf62Q6ZUJ4 267 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 CENPUQ71F23 418 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 PRPF39Q86UA1 669 aaKnown RBP10.58□□□□□ -0.72
COPB1-201ENST00000249923 BANPQ8N9N5 519 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 CMASQ8NFW8 434 aaPredicted RBP10.58□□□□□ -0.72
COPB1-201ENST00000249923 RFWD2Q8NHY2 731 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 CCHCR1Q8TD31 782 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 NLRP4Q96MN2 994 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 LHX5Q9H2C1 402 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 ACSS3Q9H6R3 686 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 DDX56Q9NY93 547 aaKnown RBP10.58□□□□□ -0.72
COPB1-201ENST00000249923 GABBR2O75899 941 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 FAM155BO75949 473 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms