RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MED10Q9BTT4 135 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 C11orf84Q9BUA3 381 aaPredicted RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 PACSIN1Q9BY11 444 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 UBE2OQ9C0C9 1292 aaKnown RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 RXFP1Q9HBX9 757 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 DMAP1Q9NPF5 467 aaPredicted RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 LZTFL1Q9NQ48 299 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 MRPL17Q9NRX2 175 aaKnown RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 CNOT8Q9UFF9 292 aaKnown RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 GUCA1BQ9UMX6 200 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 PCDHB5Q9Y5E4 795 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 TCRBV5S1A1TA0A578 114 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 LINC01553A4QN01 128 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 HCRTO43612 131 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 LILRB3O75022 631 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 AP1G2O75843 785 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 CALCAP01258 141 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 GLI1P08151 1106 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
LSM8-201ENST00000249299 RAB33AQ14088 237 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 RAB30Q15771 203 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 PSMD5Q16401 504 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 MMS22LQ6ZRQ5 1243 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 CLEC20AQ6ZU45 233 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 RTL10Q7L3V2 364 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 TAS1R1Q7RTX1 841 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 LRRTM3Q86VH5 581 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 UBA3Q8TBC4 463 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 SLC35G2Q8TBE7 412 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 FNIP1Q8TF40 1166 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
LSM8-201ENST00000249299 ZNF653Q96CK0 615 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 MCRS1Q96EZ8 462 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 C8orf48Q96LL4 319 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 CPXM1Q96SM3 734 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 C11orf70Q9BRQ4 267 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 ZBP1Q9H171 429 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 NGRNQ9NPE2 291 aaKnown RBP13.64□□□□□ -0.23
LSM8-201ENST00000249299 COMMD8Q9NX08 183 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 SIGLEC16A6NMB1 481 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 TRIM66O15016 1216 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 ABCB4P21439 1286 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 RRM1P23921 792 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 ADORA2BP29275 332 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 TUFMP49411 452 aaKnown RBP13.64□□□□□ -0.23
LSM8-201ENST00000249299 ERVK-21P61565 698 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 MAMLD1Q13495 774 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 ACAP1Q15027 740 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 RAB41Q5JT25 222 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 PMF1Q6P1K2 205 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 SLFN11Q7Z7L1 901 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 KLHL23Q8NBE8 558 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 ZNF461Q8TAF7 563 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 TGS1Q96RS0 853 aaKnown RBP13.64□□□□□ -0.23
LSM8-201ENST00000249299 NCAPGQ9BPX3 1015 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 TRIM62Q9BVG3 475 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 CNGB3Q9NQW8 809 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 KRT82Q9NSB4 513 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 ASNSD1Q9NWL6 643 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 AFF4Q9UHB7 1163 aaKnown RBP13.64□□□□□ -0.23
LSM8-201ENST00000249299 CYTH4Q9UIA0 394 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 DUSP10Q9Y6W6 482 aa13.64□□□□□ -0.23
LSM8-201ENST00000249299 ABLIM3O94929 683 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 NOP2P46087 812 aaKnown RBP13.63□□□□□ -0.23
LSM8-201ENST00000249299 GNG11P61952 73 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 SLC39A12Q504Y0 691 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 C11orf63Q6NUN7 778 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 DNAJC24Q6P3W2 148 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 BEND5Q7L4P6 421 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 PIGZQ86VD9 579 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 XYLT1Q86Y38 959 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
LSM8-201ENST00000249299 TPCN2Q8NHX9 752 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 ZNF564Q8TBZ8 553 aaPredicted RBP13.63□□□□□ -0.23
LSM8-201ENST00000249299 IRGQQ8WZA9 623 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 SPATA17Q96L03 361 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 TMEM209Q96SK2 561 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 SMOQ99835 787 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 CLSTN3Q9BQT9 956 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 NUP85Q9BW27 656 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 LRRC4Q9HBW1 653 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 TMLHEQ9NVH6 421 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 EHD2Q9NZN4 543 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 JRKLQ9Y4A0 524 aa13.63□□□□□ -0.23
LSM8-201ENST00000249299 TSC2P49815 1807 aa13.62□□□□□ -0.23
LSM8-201ENST00000249299 MACROD2A1Z1Q3 448 aa13.62□□□□□ -0.23
LSM8-201ENST00000249299 LCHNA4D1U4 455 aa13.62□□□□□ -0.23
LSM8-201ENST00000249299 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
LSM8-201ENST00000249299 TMEM191CA6NGB0 347 aa13.62□□□□□ -0.23
LSM8-201ENST00000249299 HHLA1C9JL84 531 aa13.62□□□□□ -0.23
LSM8-201ENST00000249299 E5RJQ4 531 aa13.62□□□□□ -0.23
LSM8-201ENST00000249299 H0YGN5 161 aa13.62□□□□□ -0.23
LSM8-201ENST00000249299 MYO1FO00160 1098 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms