RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 SKA1Q96BD8 255 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 COQ7Q99807 217 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 PHACTR1Q9C0D0 580 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 PREBQ9HCU5 417 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 POLLQ9UGP5 575 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 ATP11BQ9Y2G3 1177 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 ARIH1Q9Y4X5 557 aaPredicted RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 FKBP6O75344 327 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 TOM1L1O75674 476 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 TM7SF2O76062 418 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 DLDP09622 509 aaKnown RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 UNGP13051 313 aaPredicted RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 GAD2Q05329 585 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 FAAP100Q0VG06 881 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 ANO4Q32M45 955 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 TRAPPC3LQ5T215 181 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 RNASEH2BQ5TBB1 312 aaKnown RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 SPOCD1Q6ZMY3 1216 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 TMEM179Q6ZVK1 233 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 ANO5Q75V66 913 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 UTS2BQ765I0 119 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 GSTCDQ8NEC7 633 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 PPP4R1Q8TF05 950 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 DDX1Q92499 740 aaKnown RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 IFT43Q96FT9 208 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 MCEEQ96PE7 176 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 SH3GL1Q99961 368 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 SHCBP1LQ9BZQ2 653 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 ACSS3Q9H6R3 686 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 PCDH9Q9HC56 1237 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 SSU72Q9NP77 194 aaKnown RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 PPM1HQ9ULR3 514 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 KIF13BQ9NQT8 1826 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 KRT37O76014 449 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 STK10O94804 968 aaKnown RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 GH2P01242 217 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 HARSP12081 509 aaKnown RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 NCF2P19878 526 aaPredicted RBP9.65□□□□□ -0.86
SRSF6-201ENST00000244020 KBTBD12Q3ZCT8 623 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 LPCAT4Q643R3 524 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 APOPT1Q96IL0 206 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 SLITRK1Q96PX8 696 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 PANX3Q96QZ0 392 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 MECRQ9BV79 373 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 LMCD1Q9NZU5 365 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 SLC7A8Q9UHI5 535 aa9.65□□□□□ -0.86
SRSF6-201ENST00000244020 LSM1O15116 133 aaKnown RBP9.65□□□□□ -0.87
SRSF6-201ENST00000244020 RNASEH1O60930 286 aaKnown RBP9.65□□□□□ -0.87
SRSF6-201ENST00000244020 TGDSO95455 350 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 RXRBP28702 533 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 QARSP47897 775 aaKnown RBP9.65□□□□□ -0.87
SRSF6-201ENST00000244020 INPP1P49441 399 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 RPL7AP62424 266 aaKnown RBP9.65□□□□□ -0.87
SRSF6-201ENST00000244020 SMTNL2Q2TAL5 461 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 TFDP3Q5H9I0 405 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 FNBP1LQ5T0N5 605 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 RAPH1Q70E73 1250 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 ZNF677Q86XU0 584 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 FBXO27Q8NI29 283 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 NAT14Q8WUY8 206 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 KLHL4Q9C0H6 718 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 ETNK2Q9NVF9 386 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 CCNL1Q9UK58 526 aaPredicted RBP9.65□□□□□ -0.87
SRSF6-201ENST00000244020 ZHX2Q9Y6X8 837 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 NHSL1Q5SYE7 1610 aa9.65□□□□□ -0.87
SRSF6-201ENST00000244020 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 HNRNPCL2B2RXH8 293 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 TRIM49D1C9J1S8 452 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 TMCC1O94876 653 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 VAV1P15498 845 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 YWHABP31946 246 aaKnown RBP9.64□□□□□ -0.87
SRSF6-201ENST00000244020 ECE1P42892 770 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 ACTR3P61158 418 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 PTP4A2Q12974 167 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 ANKRD20A4Q4UJ75 823 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 EFHC1Q5JVL4 640 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 SPOPLQ6IQ16 392 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 RSBN1LQ6PCB5 846 aaPredicted RBP9.64□□□□□ -0.87
SRSF6-201ENST00000244020 SATL1Q86VE3 508 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 LARGE2Q8N3Y3 721 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 SRPK1Q96SB4 655 aaKnown RBP9.64□□□□□ -0.87
SRSF6-201ENST00000244020 DDX18Q9NVP1 670 aaKnown RBP9.64□□□□□ -0.87
SRSF6-201ENST00000244020 KCNK4Q9NYG8 393 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 TBX20Q9UMR3 447 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 IRS2Q9Y4H2 1338 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 F8VP50 259 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 WDR46O15213 610 aaKnown RBP9.64□□□□□ -0.87
SRSF6-201ENST00000244020 GRIN3BO60391 1043 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 CST8O60676 142 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 DDHD2O94830 711 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 WEE2P0C1S8 567 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 RAP1GDS1P52306 607 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 USP46P62068 366 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 SLC25A3Q00325 362 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 PRKD1Q15139 912 aaPredicted RBP9.64□□□□□ -0.87
SRSF6-201ENST00000244020 ZNF394Q53GI3 561 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 ANKRD22Q5VYY1 191 aa9.64□□□□□ -0.87
SRSF6-201ENST00000244020 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms