RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 LRRC37BQ96QE4 947 aa17.64■□□□□ 0.41
SSPN-201ENST00000242729 ADPGKQ9BRR6 497 aa17.64■□□□□ 0.41
SSPN-201ENST00000242729 FAM49BQ9NUQ9 324 aa17.64■□□□□ 0.41
SSPN-201ENST00000242729 PIH1D1Q9NWS0 290 aaKnown RBP17.64■□□□□ 0.41
SSPN-201ENST00000242729 USP18Q9UMW8 372 aa17.64■□□□□ 0.41
SSPN-201ENST00000242729 LCTP09848 1927 aa17.64■□□□□ 0.41
SSPN-201ENST00000242729 A0A087WZ62 844 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 H7C0C1 242 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 ATP5OP48047 213 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 YWHAEP62258 255 aaKnown RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 ZC3H12AQ5D1E8 599 aaKnown RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 CTAGE3PQ8IX95 158 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 CHST13Q8NET6 341 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 ZNF75CPQ92670 426 aaPredicted RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 NKD2Q969F2 451 aaPredicted RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 TTC17Q96AE7 1141 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 PRR11Q96HE9 360 aaPredicted RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 FDXACB1Q9BRP7 624 aaPredicted RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 FARP1Q9Y4F1 1045 aaPredicted RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 POLR2AP24928 1970 aaKnown RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 SSC5DA1L4H1 1573 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 SIGLEC16A6NMB1 481 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 STAG3L1P0CL83 205 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 ARL4CP56559 192 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 HADHQ16836 314 aaKnown RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 PPP6R3Q5H9R7 873 aaPredicted RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 MTDHQ86UE4 582 aaKnown RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 PPIL6Q8IXY8 311 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.63■□□□□ 0.41
SSPN-201ENST00000242729 CXorf56Q9H5V9 222 aa17.63■□□□□ 0.41
SSPN-201ENST00000242729 NGRNQ9NPE2 291 aaKnown RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 DDX56Q9NY93 547 aaKnown RBP17.63■□□□□ 0.41
SSPN-201ENST00000242729 ABHD2P08910 425 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 SETDB1Q15047 1291 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 TAF1BQ53T94 588 aaPredicted RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 PRPF39Q86UA1 669 aaKnown RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 NAT8LQ8N9F0 302 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 TTC25Q96NG3 672 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 KCNG1Q9UIX4 513 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 DRG1Q9Y295 367 aaKnown RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 CFAP73A6NFT4 308 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 KBTBD13C9JR72 458 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 E5RJQ4 531 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 FZD9O00144 591 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 TYROBPO43914 113 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 TXNP10599 105 aaKnown RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 EPHB2P29323 1055 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 PTPN11Q06124 597 aaPredicted RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 TTLL12Q14166 644 aaPredicted RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 KBTBD12Q3ZCT8 623 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 WLSQ5T9L3 541 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 APOBEC3FQ8IUX4 373 aaKnown RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 MIS12Q9H081 205 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 SHOC2Q9UQ13 582 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 AKT3Q9Y243 479 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 RNF8O76064 485 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 UPP2O95045 317 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 UNC5CO95185 931 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 ZNF286BP0CG31 522 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 PDGFRAP16234 1089 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 SLC8A1P32418 973 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 ATXN1P54253 815 aaKnown RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 ZNF268Q14587 947 aaPredicted RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 LRRC38Q5VT99 294 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 RELL1Q8IUW5 271 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 CCHCR1Q8TD31 782 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 SERAC1Q96JX3 654 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 FAM111AQ96PZ2 611 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 MYCBPQ99417 103 aaPredicted RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 B3GNT5Q9BYG0 378 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 ARHGEF3Q9NR81 526 aa17.62■□□□□ 0.41
SSPN-201ENST00000242729 NKX1-2Q9UD57 310 aaPredicted RBP17.62■□□□□ 0.41
SSPN-201ENST00000242729 MCM3APO60318 1980 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 UGT1A9O60656 530 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 EDF1O60869 148 aaKnown RBP17.61■□□□□ 0.41
SSPN-201ENST00000242729 TFE3P19532 575 aaPredicted RBP17.61■□□□□ 0.41
SSPN-201ENST00000242729 CYP3A5P20815 502 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 BAG6P46379 1132 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 DPYSL3Q14195 570 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 MXD4Q14582 209 aaPredicted RBP17.61■□□□□ 0.41
SSPN-201ENST00000242729 NAA25Q14CX7 972 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 PDK4Q16654 411 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 SCUBE3Q8IX30 993 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 AGGF1Q8N302 714 aaeCLIP17.61■□□□□ 0.41
SSPN-201ENST00000242729 RXFP2Q8WXD0 754 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 UGT1A7Q9HAW7 530 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 UGT1A10Q9HAW8 530 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 UGT1A8Q9HAW9 530 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 RAB6BQ9NRW1 208 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 CCDC195A0A1B0GUA6 201 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 ACKR2O00590 384 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 MCF2LO15068 1137 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 KRT7P08729 469 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 ABCD1P33897 745 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 NDST1P52848 882 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 GSCP56915 257 aaPredicted RBP17.61■□□□□ 0.41
SSPN-201ENST00000242729 FAAP100Q0VG06 881 aa17.61■□□□□ 0.41
SSPN-201ENST00000242729 BMPR2Q13873 1038 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms