RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TCRBV7S2A1N4TA0A589 114 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 SART1O43290 800 aaKnown RBP16■□□□□ 0.15
HDHD3-201ENST00000238379 LRCH4O75427 683 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 BEST1O76090 585 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 TYMPP19971 482 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 FLT3P36888 993 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 OR1G1P47890 313 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 GATMP50440 423 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 ZNF143P52747 638 aaPredicted RBP16■□□□□ 0.15
HDHD3-201ENST00000238379 SLC7A5Q01650 507 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 ACAP1Q15027 740 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 ATP13A4Q4VNC1 1196 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 CLEC20AQ6ZU45 233 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 DEFB128Q7Z7B8 93 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 PIGZQ86VD9 579 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 EXD1Q8NHP7 514 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 VWCEQ96DN2 955 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 PAWRQ96IZ0 340 aaKnown RBP16■□□□□ 0.15
HDHD3-201ENST00000238379 DDX47Q9H0S4 455 aaKnown RBP16■□□□□ 0.15
HDHD3-201ENST00000238379 PCDHB8Q9UN66 801 aa16■□□□□ 0.15
HDHD3-201ENST00000238379 ARHGEF37A1IGU5 675 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 FSCN2O14926 492 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 ZMYND10O75800 440 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 ZRANB2O95218 330 aaKnown RBP eCLIP15.99■□□□□ 0.15
HDHD3-201ENST00000238379 GPD1P21695 349 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 SCNN1AP37088 669 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 CDR1P51861 262 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 SLC8A3P57103 927 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 TXNRD3NBQ6F5E7 133 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 OVOS1Q6IE37 1185 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 FAM171BQ6P995 826 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 FAM35AQ86V20 835 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 PRELID2Q8N945 189 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 RXFP2Q8WXD0 754 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 FAM193BQ96PV7 902 aaPredicted RBP15.99■□□□□ 0.15
HDHD3-201ENST00000238379 PKMYT1Q99640 499 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 CNPY3Q9BT09 278 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 MED10Q9BTT4 135 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 C11orf49Q9H6J7 331 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 NRDE2Q9H7Z3 1164 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 TMEM39AQ9NV64 488 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 LRFN2Q9ULH4 789 aa15.99■□□□□ 0.15
HDHD3-201ENST00000238379 KIAA0100Q14667 2235 aaKnown RBP15.99■□□□□ 0.15
HDHD3-201ENST00000238379 HOXA2O43364 376 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 RAD51CO43502 376 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 GRAP2O75791 330 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 FAM200BP0CF97 657 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 LCP1P13796 627 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 PDGFRAP16234 1089 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 SLC25A11Q02978 314 aaKnown RBP15.98■□□□□ 0.15
HDHD3-201ENST00000238379 SIX1Q15475 284 aaPredicted RBP15.98■□□□□ 0.15
HDHD3-201ENST00000238379 LRRC26Q2I0M4 334 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 INTS6LQ5JSJ4 861 aaKnown RBP15.98■□□□□ 0.15
HDHD3-201ENST00000238379 SLC26A9Q7LBE3 791 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 POLNQ7Z5Q5 900 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 NPAS4Q8IUM7 802 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 OR10T2Q8NGX3 314 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 KCTD13Q8WZ19 329 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 RUBCNQ92622 972 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 HINFPQ9BQA5 517 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 HERPUD2Q9BSE4 406 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 SLITRK6Q9H5Y7 841 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 KRT82Q9NSB4 513 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 STIM2Q9P246 746 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 PRG3Q9Y2Y8 225 aaPredicted RBP15.98■□□□□ 0.15
HDHD3-201ENST00000238379 GOLGA6L10A0A0M3HER8 536 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 DPYSL4O14531 572 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 GLI1P08151 1106 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 CLTBP09497 229 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 MCM3P25205 808 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 GJC1P36383 396 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 PPP2R5EQ16537 467 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 ARCQ7LC44 396 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 THEM5Q8N1Q8 247 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 CLEC4CQ8WTT0 213 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 HNRNPLLQ8WVV9 542 aaKnown RBP15.98■□□□□ 0.15
HDHD3-201ENST00000238379 SMOQ99835 787 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 TMEM30AQ9NV96 361 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 ASNSD1Q9NWL6 643 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 ZNF446Q9NWS9 450 aa15.98■□□□□ 0.15
HDHD3-201ENST00000238379 NRP1O14786 923 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 AP1G2O75843 785 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 RNF8O76064 485 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 RARAP10276 462 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 RALAP11233 206 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 IL1R2P27930 398 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 MAP3K7CLP57077 242 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 YWHAHQ04917 246 aaPredicted RBP15.97■□□□□ 0.15
HDHD3-201ENST00000238379 LLGL1Q15334 1064 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 CCDC14Q49A88 953 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 SH3PXD2AQ5TCZ1 1133 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 ANKS1BQ7Z6G8 1248 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 LRRTM3Q86VH5 581 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 RCOR2Q8IZ40 523 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 ZMIZ2Q8NF64 920 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 MYLPFQ96A32 169 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 TMEM209Q96SK2 561 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 TMLHEQ9NVH6 421 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 AMACRQ9UHK6 382 aa15.97■□□□□ 0.15
HDHD3-201ENST00000238379 PI4K2BG5E9Z4 385 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms