RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CFAP99D6REC4 459 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 DDX3XO00571 662 aaKnown RBP eCLIP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 MGRN1O60291 552 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 ANPEPP15144 967 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 ADRA1DP25100 572 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 C6orf10Q5SRN2 563 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 SNX19Q92543 992 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 MEGF6O75095 1541 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 DNALI1O14645 258 aaPredicted RBP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 PBX1P40424 430 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 SEL1L3Q68CR1 1132 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 RNF139Q8WU17 664 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 PTPRN2Q92932 1015 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 TSPAN17Q96FV3 270 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 WRNIP1Q96S55 665 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 COQ7Q99807 217 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 PI4K2AQ9BTU6 479 aa14.32□□□□□ -0.12
HCFC2-201ENST00000229330 RAVER2Q9HCJ3 691 aaKnown RBP14.32□□□□□ -0.12
HCFC2-201ENST00000229330 AGPSO00116 658 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 PROSCO94903 275 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 PGM3O95394 542 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 GSCP56915 257 aaPredicted RBP14.31□□□□□ -0.12
HCFC2-201ENST00000229330 KCNK10P57789 538 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 NANOGNBQ7Z5D8 188 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.31□□□□□ -0.12
HCFC2-201ENST00000229330 TMEM121Q9BTD3 319 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 CNTNAP4Q9C0A0 1308 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 ETS2P15036 469 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 RPA3P35244 121 aaPredicted RBP14.31□□□□□ -0.12
HCFC2-201ENST00000229330 ACOT2P49753 483 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 RNF220Q5VTB9 566 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 ZNF398Q8TD17 642 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 IFT43Q96FT9 208 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 PPP1R16BQ96T49 567 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 PLGRKTQ9HBL7 147 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 HACD3Q9P035 362 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 FAM8A1Q9UBU6 413 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 ASNA1O43681 348 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 SEC23AQ15436 765 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 POU5F2Q8N7G0 328 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 KCNK4Q9NYG8 393 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 COPG2Q9UBF2 871 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 SLC39A10Q9ULF5 831 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 TMCO1Q9UM00 188 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 PCDHA3Q9Y5H8 950 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 COL3A1P02461 1466 aaPredicted RBP14.31□□□□□ -0.12
HCFC2-201ENST00000229330 FAM205AQ6ZU69 1335 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 RASSF9O75901 435 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 CNTFP26441 200 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 RPL10AP62906 217 aaKnown RBP14.31□□□□□ -0.12
HCFC2-201ENST00000229330 UBE3AQ05086 875 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 DEPDC1Q5TB30 811 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 ZCCHC7Q8N3Z6 543 aaKnown RBP14.31□□□□□ -0.12
HCFC2-201ENST00000229330 USP13Q92995 863 aaPredicted RBP14.31□□□□□ -0.12
HCFC2-201ENST00000229330 RRN3Q9NYV6 651 aa14.31□□□□□ -0.12
HCFC2-201ENST00000229330 MAP2P11137 1827 aaKnown RBP14.31□□□□□ -0.12
HCFC2-201ENST00000229330 A0A087WXM4 84 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 C3orf70A6NLC5 250 aaPredicted RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 MYO1GB0I1T2 1018 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 NME3Q13232 169 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 PTK6Q13882 451 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 LBRQ14739 615 aaKnown RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 FAXCQ5TGI0 409 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 ZNF554Q86TJ5 538 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 MRPS26Q9BYN8 205 aaKnown RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 OSBPL7Q9BZF2 842 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 EXOSC4Q9NPD3 245 aaKnown RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 ZMYND8Q9ULU4 1186 aaPredicted RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 A8MUI8 341 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 RPS6KA3P51812 740 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 GPAT2Q6NUI2 795 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 RBM44Q6ZP01 1051 aaKnown RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 EXOC3L1Q86VI1 746 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 P3H2Q8IVL5 708 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 FAM162AQ96A26 154 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 RUSC1Q9BVN2 902 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 THAP1Q9NVV9 213 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 RABGEF1Q9UJ41 708 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 RASA1P20936 1047 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 FBXO33Q7Z6M2 555 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 STKLD1Q8NE28 680 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 RIN3Q8TB24 985 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 DIS3LQ8TF46 1054 aaKnown RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 BBS2Q9BXC9 721 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 PCDH9Q9HC56 1237 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 ARHGEF38Q9NXL2 777 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 KANSL1LA0AUZ9 987 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 YY1P25490 414 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 GTF2H1P32780 548 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 DRG2P55039 364 aaKnown RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 GIT2Q14161 759 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 COBLL1Q53SF7 1204 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 SPOCD1Q6ZMY3 1216 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 RFWD2Q8NHY2 731 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 ZNF669Q96BR6 464 aaPredicted RBP14.3□□□□□ -0.12
HCFC2-201ENST00000229330 SLC13A4Q9UKG4 626 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 ATP8B3O60423 1300 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 RRM1P23921 792 aa14.3□□□□□ -0.12
HCFC2-201ENST00000229330 NFKBIAP25963 317 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms