RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TCF7P36402 384 aaPredicted RBP14.29□□□□□ -0.12
NFKB1-201ENST00000226574 NFIL3Q16649 462 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 UGCGQ16739 394 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 OR5B17Q8NGF7 314 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 USP13Q92995 863 aaPredicted RBP14.29□□□□□ -0.12
NFKB1-201ENST00000226574 MYH2Q9UKX2 1941 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 AP1G2O75843 785 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 PGK2P07205 417 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 YWHAHQ04917 246 aaPredicted RBP14.29□□□□□ -0.12
NFKB1-201ENST00000226574 ITGA9Q13797 1035 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 PCSK7Q16549 785 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 ECHDC2Q86YB7 292 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 MICALL2Q8IY33 904 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 CENPTQ96BT3 561 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 OATP04181 439 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 PAPOLAP51003 745 aaKnown RBP14.29□□□□□ -0.12
NFKB1-201ENST00000226574 DRG2P55039 364 aaKnown RBP14.29□□□□□ -0.12
NFKB1-201ENST00000226574 PLIN5Q00G26 463 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 MMRN1Q13201 1228 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 C4orf19Q8IY42 314 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 DEFB107AQ8IZN7 70 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 TMC2Q8TDI7 906 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 LPAR1Q92633 364 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 USP6NLQ92738 828 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 TIPINQ9BVW5 301 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 NT5C1AQ9BXI3 368 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
NFKB1-201ENST00000226574 KRT82Q9NSB4 513 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 SLC17A7Q9P2U7 560 aa14.29□□□□□ -0.12
NFKB1-201ENST00000226574 VIL1P09327 827 aaKnown RBP14.28□□□□□ -0.12
NFKB1-201ENST00000226574 STIP1P31948 543 aaKnown RBP14.28□□□□□ -0.12
NFKB1-201ENST00000226574 NME5P56597 212 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 MAMLD1Q13495 774 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 PTK6Q13882 451 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 TMEM132DQ14C87 1099 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 SLC1A5Q15758 541 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 C15orf59Q2T9L4 293 aaPredicted RBP14.28□□□□□ -0.12
NFKB1-201ENST00000226574 EFHC2Q5JST6 749 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 SLC26A11Q86WA9 606 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 RASGEF1CQ8N431 466 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 ZNF280CQ8ND82 737 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 BTBD10Q9BSF8 475 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 WDR35Q9P2L0 1181 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 KCNK1O00180 336 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 SLC26A4O43511 780 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 MSX2P35548 267 aaPredicted RBP14.28□□□□□ -0.12
NFKB1-201ENST00000226574 HIRAP54198 1017 aaPredicted RBP14.28□□□□□ -0.12
NFKB1-201ENST00000226574 SCUBE3Q8IX30 993 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 DDIASQ8IXT1 998 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 FAM172AQ8WUF8 416 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 SDCCAG3Q96C92 435 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 FAM167AQ96KS9 214 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 APPL1Q9UKG1 709 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 HNRNPCL1O60812 293 aaKnown RBP14.28□□□□□ -0.12
NFKB1-201ENST00000226574 SLC25A3Q00325 362 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 EN1Q05925 392 aaPredicted RBP14.28□□□□□ -0.12
NFKB1-201ENST00000226574 GOLGA7BQ2TAP0 167 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 ANO4Q32M45 955 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 OTOAQ7RTW8 1153 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 LRRC19Q9H756 370 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 PCDH9Q9HC56 1237 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 CYP4F12Q9HCS2 524 aa14.28□□□□□ -0.12
NFKB1-201ENST00000226574 M0R2N6 131 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 XPOTO43592 962 aaKnown RBP14.27□□□□□ -0.12
NFKB1-201ENST00000226574 PROCP04070 461 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 PPM1FP49593 454 aaPredicted RBP14.27□□□□□ -0.12
NFKB1-201ENST00000226574 SULT1E1P49888 294 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 FLOT2Q14254 428 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 ARL13BQ3SXY8 428 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 LRRC74BQ6ZQY2 392 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 C2orf40Q9H1Z8 148 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 ACSS2Q9NR19 701 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 DDX18Q9NVP1 670 aaKnown RBP14.27□□□□□ -0.12
NFKB1-201ENST00000226574 VAV3Q9UKW4 847 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 RPTORQ8N122 1335 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 OGTO15294 1046 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 AKAP10O43572 662 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 DCXO43602 365 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 SPDYE6P0CI01 402 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 ETS2P15036 469 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 GARTP22102 1010 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 MIPP30301 263 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 CNTN2Q02246 1040 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 DSG1Q02413 1049 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 PGM5Q15124 567 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 VPS72Q15906 364 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.12
NFKB1-201ENST00000226574 SLC24A2Q9UI40 661 aa14.27□□□□□ -0.12
NFKB1-201ENST00000226574 MON2Q7Z3U7 1717 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 GAKO14976 1311 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 UBA6A0AVT1 1052 aaPredicted RBP14.27□□□□□ -0.13
NFKB1-201ENST00000226574 MAGEA13PA6NCF6 341 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 FSCN2O14926 492 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 MCF2P10911 925 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 ACADSP16219 412 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 TPH1P17752 444 aa14.27□□□□□ -0.13
NFKB1-201ENST00000226574 TFE3P19532 575 aaPredicted RBP14.27□□□□□ -0.13
NFKB1-201ENST00000226574 TAC1P20366 129 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms