RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ACSL3O95573 720 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 PDHA1P08559 390 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 CREB1P16220 341 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 CHRNB2P17787 502 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 OR1G1P47890 313 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 MTMR3Q13615 1198 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 NUGGCQ68CJ6 796 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 TMEM174Q8WUU8 243 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 PGBD4Q96DM1 585 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 TMEM176AQ96HP8 235 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 TMEM106CQ9BVX2 250 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 MIS12Q9H081 205 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 XYLT2Q9H1B5 865 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 DAAM1Q9Y4D1 1078 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 CYB561D2O14569 222 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 HCRTO43612 131 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 GRAP2O75791 330 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 TMEM253P0C7T8 217 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 ARPP19P56211 112 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 BCAR1P56945 870 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 DR1Q01658 176 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 PTPN11Q06124 597 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 C9orf57Q5W0N0 161 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 OR6B2Q6IFH4 312 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 ACAD10Q6JQN1 1059 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 DNAJC24Q6P3W2 148 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 LRIG3Q6UXM1 1119 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 TRPM8Q7Z2W7 1104 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 RHOT2Q8IXI1 618 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 SMG8Q8ND04 991 aaKnown RBP12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 LPIN3Q9BQK8 851 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 DNAI2Q9GZS0 605 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 ERVK-5Q9HDB9 667 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 NOCTQ9UK39 431 aaKnown RBP12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 ATXN2Q99700 1313 aaKnown RBP12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 TRIP12Q14669 1992 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 ARL5CA6NH57 179 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 TCP11X1B4DZS4 312 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 ATICP31939 592 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 PMS2P54278 862 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 TLE2Q04725 743 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 LONRF1Q17RB8 773 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 TFAP2BQ92481 460 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 C18orf8Q96DM3 657 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 TWNKQ96RR1 684 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 MRPL45Q9BRJ2 306 aaKnown RBP12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 SAGE1Q9NXZ1 904 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 FGFR1P11362 822 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 ASPAP45381 313 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 KCNJ1P48048 391 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 C1QTNF8P60827 252 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 XRCC4Q13426 336 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 LRRC8DQ7L1W4 858 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 FAM129AQ9BZQ8 928 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
TNFAIP1-201ENST00000226225 MKI67P46013 3256 aaKnown RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 CST5P28325 142 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 CYP2C18P33260 490 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 ERFP50548 548 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 CLCNKBP51801 687 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 SLC8A3P57103 927 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 TRIP13Q15645 432 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 CLEC16AQ2KHT3 1053 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 UBXN11Q5T124 520 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 FAM47EQ6ZV65 393 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 TMEM39AQ9NV64 488 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 SLC38A7Q9NVC3 462 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 BARX2Q9UMQ3 279 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 MGRN1O60291 552 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 MGEA5O60502 916 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 ACO1P21399 889 aaKnown RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 ANXA13P27216 316 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 SESN3P58005 492 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 SV2CQ496J9 727 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 ERMARDQ5T6L9 678 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 DAB2IPQ5VWQ8 1189 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 CAPRIN2Q6IMN6 1127 aaKnown RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 BZW1Q7L1Q6 419 aaKnown RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 HOOK3Q86VS8 718 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 SDCBP2Q9H190 292 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 SYNJ2BP-COX16A0A087WUM0 186 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 GZMAP12544 262 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 CDO1Q16878 200 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 THEMIS2Q5TEJ8 643 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 WSCD1Q658N2 575 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 ADGRF2Q8IZF7 708 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 PBKQ96KB5 322 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 TRIM7Q9C029 511 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 COX16Q9P0S2 106 aa12.29□□□□□ -0.44
TNFAIP1-201ENST00000226225 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
TNFAIP1-201ENST00000226225 KRT16P08779 473 aa12.28□□□□□ -0.44
TNFAIP1-201ENST00000226225 SELPP16109 830 aa12.28□□□□□ -0.44
TNFAIP1-201ENST00000226225 DENND1BQ6P3S1 775 aa12.28□□□□□ -0.44
TNFAIP1-201ENST00000226225 NT5DC4Q86YG4 428 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms