RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 CNPY3Q9BT09 278 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 FAM114A2Q9NRY5 505 aa15.64■□□□□ 0.1
CCDC47-201ENST00000225726 TSC2P49815 1807 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 DPYSL4O14531 572 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 ODC1P11926 461 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 TKTP29401 623 aaKnown RBP15.64■□□□□ 0.09
CCDC47-201ENST00000225726 PLA2G4AP47712 749 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 ATP13A4Q4VNC1 1196 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 SND1Q7KZF4 910 aaKnown RBP eCLIP15.64■□□□□ 0.091e-7■■■■■ 29.2
CCDC47-201ENST00000225726 PAAF1Q9BRP4 392 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 HERPUD2Q9BSE4 406 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 TRIM51Q9BSJ1 452 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 HOMER3Q9NSC5 361 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 XPO1O14980 1071 aaKnown RBP15.64■□□□□ 0.09
CCDC47-201ENST00000225726 GABBR2O75899 941 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 RNF8O76064 485 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 ODF2Q5BJF6 829 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 ZFYVE27Q5T4F4 411 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 RXFP2Q8WXD0 754 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 RNF25Q96BH1 459 aaPredicted RBP15.64■□□□□ 0.09
CCDC47-201ENST00000225726 ACBD3Q9H3P7 528 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 HTTP42858 3142 aa15.64■□□□□ 0.09
CCDC47-201ENST00000225726 PAPSS1O43252 624 aaPredicted RBP15.63■□□□□ 0.09
CCDC47-201ENST00000225726 ATP2C2O75185 946 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 ACAT1P24752 427 aaKnown RBP15.63■□□□□ 0.09
CCDC47-201ENST00000225726 PCK1P35558 622 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 TIGD5Q53EQ6 642 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 SPOCD1Q6ZMY3 1216 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 FUKQ8N0W3 1084 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 PIWIL1Q96J94 861 aaKnown RBP15.63■□□□□ 0.09
CCDC47-201ENST00000225726 SYT15Q9BQS2 421 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 ERP44Q9BS26 406 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 DUSP16Q9BY84 665 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 KLHL11Q9NVR0 708 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 OGDHLQ9ULD0 1010 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 PDGFRAP16234 1089 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 SLC8A3P57103 927 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 TRADDQ15628 312 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 MDH1BQ5I0G3 518 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 DUPD1Q68J44 220 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 TXNRD3NBQ6F5E7 133 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 GLB1LQ6UWU2 654 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 FAM43BQ6ZT52 329 aaPredicted RBP15.63■□□□□ 0.09
CCDC47-201ENST00000225726 SLCO2A1Q92959 643 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 DEFB118Q96PH6 123 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 HEMGNQ9BXL5 484 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 DCLK3Q9C098 648 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 CDH9Q9ULB4 789 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 PCNTO95613 3336 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 PI4K2BG5E9Z4 385 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 LLGL1Q15334 1064 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 TRNP1Q6NT89 227 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 MFSD7Q6UXD7 560 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 CCDC105Q8IYK2 499 aa15.63■□□□□ 0.09
CCDC47-201ENST00000225726 CYP11A1P05108 521 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 CCL5P13501 91 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 PLCB3Q01970 1234 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 KIAA0319Q5VV43 1072 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 ANKS1BQ7Z6G8 1248 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 METTL23Q86XA0 190 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 SCUBE3Q8IX30 993 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 C1orf54Q8WWF1 131 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 ZWILCHQ9H900 591 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 CRTAC1Q9NQ79 661 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 DSEQ9UL01 958 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 HPCAL4Q9UM19 191 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 DAPK3O43293 454 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 ECHS1P30084 290 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 FLT3P36888 993 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 HLTFQ14527 1009 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCDC47-201ENST00000225726 MTFR1Q15390 333 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 DCLRE1AQ6PJP8 1040 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 CD300LGQ6UXG3 332 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 URGCPQ8TCY9 931 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 RAPGEF5Q92565 580 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 GDAP1L1Q96MZ0 367 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 MED10Q9BTT4 135 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 M0QZQ0 153 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 B3GAT3O94766 335 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 TRUB2O95900 331 aaKnown RBP15.62■□□□□ 0.09
CCDC47-201ENST00000225726 COL6A1P12109 1028 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 NPR3P17342 541 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 DESP17661 470 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 IL1R2P27930 398 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 PCSK1P29120 753 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 MIPP30301 263 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 DRG2P55039 364 aaKnown RBP15.62■□□□□ 0.09
CCDC47-201ENST00000225726 PAQR9Q6ZVX9 377 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 SLC26A9Q7LBE3 791 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 ARCQ7LC44 396 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 GPATCH11Q8N954 259 aa15.62■□□□□ 0.09
CCDC47-201ENST00000225726 KHSRPQ92945 711 aaKnown RBP eCLIP15.62■□□□□ 0.091e-10■□□□□ 8.8
CCDC47-201ENST00000225726 TIMM13Q9Y5L4 95 aaPredicted RBP15.62■□□□□ 0.09
CCDC47-201ENST00000225726 hCG_1818297A0A087WSY0 165 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 ARHGEF37A1IGU5 675 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 LRRD1A4D1F6 860 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 C3orf70A6NLC5 250 aaPredicted RBP15.61■□□□□ 0.09
CCDC47-201ENST00000225726 PITPNM1O00562 1244 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 GRAP2O75791 330 aa15.61■□□□□ 0.09
CCDC47-201ENST00000225726 TJP3O95049 919 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms