RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RFC1P35251 1148 aaPredicted RBP23.28■■□□□ 1.32
CCDC9-201ENST00000221922 WDR4P57081 412 aaKnown RBP23.28■■□□□ 1.32
CCDC9-201ENST00000221922 KCNJ2P63252 427 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 IL9RQ01113 521 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 ZKSCAN8Q15776 578 aaPredicted RBP23.28■■□□□ 1.32
CCDC9-201ENST00000221922 SLC10A6Q3KNW5 377 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 CYP4F22Q6NT55 531 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 TRABD2AQ86V40 505 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 GLIS1Q8NBF1 620 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 SLC4A11Q8NBS3 891 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 SDCBP2Q9H190 292 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 SMYD3Q9H7B4 428 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 SAYSD1Q9NPB0 183 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 CDH8P55286 799 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 CCDC15Q0P6D6 951 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 TMED2Q15363 201 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 TXNRD3NBQ6F5E7 133 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 KIAA0319LQ8IZA0 1049 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 TTC39CQ8N584 583 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 NPLOC4Q8TAT6 608 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 TMEM176AQ96HP8 235 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 SLC5A4Q9NY91 659 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 CYTH4Q9UIA0 394 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 KAT6AQ92794 2004 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 A0A1B0GUA9 196 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 EXOC1LA0A1B0GW35 172 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 ARSEP51690 589 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 SLC25A11Q02978 314 aaKnown RBP23.27■■□□□ 1.32
CCDC9-201ENST00000221922 IRF5Q13568 498 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 TMEM132DQ14C87 1099 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 OASLQ15646 514 aaKnown RBP23.27■■□□□ 1.32
CCDC9-201ENST00000221922 ASRGL1Q7L266 308 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 NT5DC4Q86YG4 428 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 TTC13Q8NBP0 860 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 DENND1AQ8TEH3 1009 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 RMDN2Q96LZ7 410 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 ARHGEF3Q9NR81 526 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 KLHL14Q9P2G3 628 aa23.27■■□□□ 1.32
CCDC9-201ENST00000221922 PRPF4O43172 522 aaKnown RBP eCLIP23.26■■□□□ 1.318e-6■■■■□ 19.3
CCDC9-201ENST00000221922 CELF2O95319 508 aaKnown RBP23.26■■□□□ 1.31
CCDC9-201ENST00000221922 ASMTLO95671 621 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 MORF4L2Q15014 288 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 ACAP1Q15027 740 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 XYLT1Q86Y38 959 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 ITGA11Q9UKX5 1188 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 C2CD2Q9Y426 696 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 RRN3P2A6NIE6 340 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 IGF2BP3O00425 579 aaKnown RBP eCLIP23.26■■□□□ 1.31
CCDC9-201ENST00000221922 LRCH4O75427 683 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 HMGCRP04035 888 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 VDRP11473 427 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 SKIV2L2P42285 1042 aaKnown RBP23.26■■□□□ 1.31
CCDC9-201ENST00000221922 MGAT5Q09328 741 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 E2F5Q15329 346 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 JOSD2Q8TAC2 188 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 HPDLQ96IR7 371 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 CPXM1Q96SM3 734 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 ADPGKQ9BRR6 497 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 ELOVL4Q9GZR5 314 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 PCDH9Q9HC56 1237 aa23.26■■□□□ 1.31
CCDC9-201ENST00000221922 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.26■■□□□ 1.31
CCDC9-201ENST00000221922 MICAL2O94851 1124 aa23.25■■□□□ 1.31
CCDC9-201ENST00000221922 STAU1O95793 577 aaKnown RBP23.25■■□□□ 1.31
CCDC9-201ENST00000221922 ZSCAN5DPP0CG00 497 aa23.25■■□□□ 1.31
CCDC9-201ENST00000221922 PECAM1P16284 738 aaPredicted RBP23.25■■□□□ 1.31
CCDC9-201ENST00000221922 GABRB2P47870 512 aa23.25■■□□□ 1.31
CCDC9-201ENST00000221922 GPS1Q13098 491 aa23.25■■□□□ 1.31
CCDC9-201ENST00000221922 RASA2Q15283 850 aa23.25■■□□□ 1.31
CCDC9-201ENST00000221922 RGS9BPQ6ZS82 235 aa23.25■■□□□ 1.31
CCDC9-201ENST00000221922 KLHL29Q96CT2 875 aa23.25■■□□□ 1.31
CCDC9-201ENST00000221922 PITPNM3Q9BZ71 974 aa23.25■■□□□ 1.31
CCDC9-201ENST00000221922 METTL5Q9NRN9 209 aaKnown RBP23.25■■□□□ 1.31
CCDC9-201ENST00000221922 C3orf70A6NLC5 250 aaPredicted RBP23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ALOX15BO15296 676 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ADCY6O43306 1168 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 CCNB1P14635 433 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 RNASEH2BQ5TBB1 312 aaKnown RBP23.24■■□□□ 1.31
CCDC9-201ENST00000221922 SLC35B2Q8TB61 432 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ACSF2Q96CM8 615 aaPredicted RBP23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ACAP3Q96P50 834 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 TWNKQ96RR1 684 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 PPCSQ9HAB8 311 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 SENP1Q9P0U3 644 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.24■■□□□ 1.31
CCDC9-201ENST00000221922 STARD13Q9Y3M8 1113 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.24■■□□□ 1.31
CCDC9-201ENST00000221922 RALGAPA2Q2PPJ7 1873 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 M0QYV0 167 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ERBB2P04626 1255 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 GRM5P41594 1212 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 RBP5P82980 135 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 PLCB3Q01970 1234 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ADCY1Q08828 1119 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 DCAF4L1Q3SXM0 396 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ECHDC2Q86YB7 292 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ANKLE1Q8NAG6 615 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 MCRS1Q96EZ8 462 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 MIS12Q9H081 205 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 ZWILCHQ9H900 591 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 TJP2Q9UDY2 1190 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms