RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 CYTH2Q99418 400 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 VPS11Q9H270 941 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 SUDS3Q9H7L9 328 aaPredicted RBP8.28□□□□□ -1.08
SCG3-201ENST00000220478 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
SCG3-201ENST00000220478 NDE1Q9NXR1 346 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
SCG3-201ENST00000220478 CEPT1Q9Y6K0 416 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 A6NCN8 305 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 B2RBV5 119 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 ZBTB39O15060 712 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 ZNF189O75820 626 aaPredicted RBP8.28□□□□□ -1.08
SCG3-201ENST00000220478 GZMAP12544 262 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 PLS3P13797 630 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 PPM1FP49593 454 aaPredicted RBP8.28□□□□□ -1.08
SCG3-201ENST00000220478 CHN2P52757 468 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 SLC15A2Q16348 729 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 LRRC36Q1X8D7 754 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 TEX44Q53QW1 395 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 DALRD3Q5D0E6 543 aaKnown RBP8.28□□□□□ -1.08
SCG3-201ENST00000220478 INTS5Q6P9B9 1019 aaKnown RBP8.28□□□□□ -1.08
SCG3-201ENST00000220478 PGM2L1Q6PCE3 622 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 ADGRD1Q6QNK2 874 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 CDHR3Q6ZTQ4 885 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 C16orf86Q6ZW13 317 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 CHSY1Q86X52 802 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 RGL4Q8IZJ4 473 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 MARVELD2Q8N4S9 558 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 MCUR1Q96AQ8 359 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 SERAC1Q96JX3 654 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 CATSPER2Q96P56 530 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 NELL2Q99435 816 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 SAYSD1Q9NPB0 183 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 SEPT11Q9NVA2 429 aaKnown RBP8.28□□□□□ -1.08
SCG3-201ENST00000220478 FAIMQ9NVQ4 179 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 SH3GLB1Q9Y371 365 aa8.28□□□□□ -1.08
SCG3-201ENST00000220478 LOXHD1Q8IVV2 1947 aa8.27□□□□□ -1.08
SCG3-201ENST00000220478 XIRP1Q702N8 1843 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 E9PBE3 544 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 ALOX15BO15296 676 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 EPB42P16452 691 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 PSMC2P35998 433 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 ARFIP2P53365 341 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 ARHGAP4P98171 946 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCG3-201ENST00000220478 ANKRD20A4Q4UJ75 823 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 MDH1BQ5I0G3 518 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 RNASEH2BQ5TBB1 312 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 KLC3Q6P597 504 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 C3orf62Q6ZUJ4 267 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 VPS52Q8N1B4 723 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 BBS5Q8N3I7 341 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 NEDD1Q8NHV4 660 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 FRS2Q8WU20 508 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 USP6NLQ92738 828 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 PAWRQ96IZ0 340 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 MKNK1Q9BUB5 465 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 TSSK1BQ9BXA7 367 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 SENP1Q9P0U3 644 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 VAV3Q9UKW4 847 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 EFR3BQ9Y2G0 817 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 WDR37Q9Y2I8 494 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 ADAMTSL1Q8N6G6 1762 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 FAM221BA6H8Z2 402 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 TTLL13PA6NNM8 815 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 TISP43B9A030 160 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 DENRO43583 198 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 ICMTO60725 284 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 DNAJA2O60884 412 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 SUPT3HO75486 399 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 GCNT3O95395 438 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 RALAP11233 206 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 ESRRAP11474 423 aaPredicted RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 RPA1P27694 616 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 CDK8P49336 464 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 PDIA2Q13087 525 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 ZYXQ15942 572 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 CCNG2Q16589 344 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 TICAM1Q8IUC6 712 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 CLEC10AQ8IUN9 316 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 ZFPM1Q8IX07 1006 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 MYO1HQ8N1T3 1032 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 ZNF713Q8N859 430 aaPredicted RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 CELF1Q92879 486 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 TBC1D20Q96BZ9 403 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 KLF6Q99612 283 aaPredicted RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 C1orf21Q9H246 121 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 AGPAT3Q9NRZ7 376 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 GTF3C4Q9UKN8 822 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 STRIP2Q9ULQ0 834 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 MTO1Q9Y2Z2 717 aaKnown RBP8.27□□□□□ -1.09
SCG3-201ENST00000220478 PLIN4Q96Q06 1357 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 ZNF536O15090 1300 aa8.27□□□□□ -1.09
SCG3-201ENST00000220478 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
SCG3-201ENST00000220478 MEI4A8MW99 385 aa8.26□□□□□ -1.09
SCG3-201ENST00000220478 GOLGA8RI6L899 631 aa8.26□□□□□ -1.09
SCG3-201ENST00000220478 DNALI1O14645 258 aaPredicted RBP8.26□□□□□ -1.09
SCG3-201ENST00000220478 EIF3DO15371 548 aaKnown RBP eCLIP8.26□□□□□ -1.09
SCG3-201ENST00000220478 SPOPO43791 374 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms